Sequence details bmy_18152 (Coding sequence)

Part of scaffold_1657 (Scaffold)

For more information consult the page for scaffold_1657 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LSM14A ENSTTRG00000012875 (Bottlenosed dolphin)

Gene Details

LSM14A, SCD6 homolog A (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012216, Bottlenosed dolphin)

Protein Percentage 96.77%
cDNA percentage 96.85%
Ka/Ks Ratio 0.29382 (Ka = 0.0217, Ks = 0.0737)

BT.40231 ENSBTAG00000000630 (Cow)

Gene Details

protein LSM14 homolog A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000831, Cow)

Protein Percentage 96.77%
cDNA percentage 94.69%
Ka/Ks Ratio 0.11013 (Ka = 0.0201, Ks = 0.1823)

Additional orthologs identified in other species via the OPTIC pipeline.

LSM14A (Human)   Lsm14a (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1305 bp    Location:304714..278227   Strand:-
Raw sequence 
>bmy_18152
ATGTATCTCATATCCTCTGTTTTCTCACCAGTTCGGTCCTTTGGTACAGAAGACAGACCAACAGATCGTCCAATACCACCTCGAGATGAAGTCTTTGAATACATTATATTCCGTGGGAGTGATATTAAAGATCTCACTGTTTGTGAGCCACCAAAACCACAATGTTCTTTGCCTCAGGACCCAGCTATCGTTCAGTCTTCACTAGGCTCATCTACTTCTTCATTCCAGTCAGTGGGCTCCTATGGACCTTTCGGCAGGATGCCAACATACAGTCAATTCAGTCCAAGTTCATTAGTTGGGCAGCAGTTTGGGGCTGTTGGTGTTGCTGGAAGCTCCTTGACATCCTTTGGAACAGAAGCATCGAACAGCGGTGCCCTATCCCAAAGTAGTGCAGTTGGTTCTGCCTTTACACAGGATACAAGATCTCTAAAAACACAGTTATCTCAAGGTCGTTCAAGCCCTCAGTTAGACCCTTTGAGAAAAAGCCCAACCATGGAACAAGCAGTGCAGACAGCCTCGGCCCACTTACCTGCTCCAGCACCTGTTGGGAGAAGGAGCCCTGTATCATCAACCAGGCCTTTACCATCAACCAGCCAAAAAGCAATAGAGAATCAAGAGCACAGGCGAGCTGAAGTTCACAAGGTTTCAAGACCAGAAAATGAGCAACTCAGAAATGATAGCAAGAGACAAATAGTTCCAGGTGCTCCTTCAGCTCCAAGGAGAGGGCGTGGGGGTCATCGAGGTGGCAGGGGAAGATTTGGTATTCGAAGAGATGGTCCAATGAAATTTGAGAAAGACTTTGACTTTGAAAGTGCAAATGCACAATTTAACAAGGAGGAAATCGACAGAGAGTTTCATAATAAACTTAAATTGAAAGAAGATAAACTTGAGAAACAGGAGAAGCCTGTAAATGGTGAAGATAAAGGAGACTCAGGAGTTGATACCCAAAACAGTGAAGGAAATGCAGATGAAGAAGATCCACTTGGACCTAACTGCTATTATGACAAAACTAAATCTTTCTTTGATAATATTTCTTGTGATGATAATAGAGAACGGAGACCAACCTGGGCTGAAGAAAGAAGATTAAATGCAGAAACATTTGGAATCCCACTTCGTCCAAACCGTGGCCGTGGAGGGTACAGAGGCAGGGGAGGTCTTGGTTTCCGTGGTGGCCGAGGACGTGGTAGTGGCCGAGGTGGTAACTTTGCCACTCCTCGAGGATTTCGTGGTGGATTCAGAGGAGGTCGTGGGGGCAGGGAGTTTGCAGATTTCGAATATAGGAAAGACAACAAAGTTGCTGCATAG

Related Sequences

bmy_18152T0 Protein

Length: 435 aa      View alignments
>bmy_18152T0
MYLISSVFSPVRSFGTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLTVCEPPKPQCSLPQDPAIVQSSLGSSTSSFQSVGSYGPFGRMPTYSQFSPSSLVGQQFGAVGVAGSSLTSFGTEASNSGALSQSSAVGSAFTQDTRSLKTQLSQGRSSPQLDPLRKSPTMEQAVQTASAHLPAPAPVGRRSPVSSTRPLPSTSQKAIENQEHRRAEVHKVSRPENEQLRNDSKRQIVPGAPSAPRRGRGGHRGGRGRFGIRRDGPMKFEKDFDFESANAQFNKEEIDREFHNKLKLKEDKLEKQEKPVNGEDKGDSGVDTQNSEGNADEEDPLGPNCYYDKTKSFFDNISCDDNRERRPTWAEERRLNAETFGIPLRPNRGRGGYRGRGGLGFRGGRGRGSGRGGNFATPRGFRGGFRGGRGGREFADFEYRKDNKVAA*