Part of scaffold_1721 (Scaffold)

For more information consult the page for scaffold_1721 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NUPL1 ENSTTRG00000000576 (Bottlenosed dolphin)

Gene Details

nucleoporin like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000541, Bottlenosed dolphin)

Protein Percentage 91.92%
cDNA percentage 90.68%
Ka/Ks Ratio 0.22523 (Ka = 0.056, Ks = 0.2487)

NUPL1 ENSBTAG00000015225 (Cow)

Gene Details

nucleoporin p58/p45

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000032816, Cow)

Protein Percentage 90.57%
cDNA percentage 87.99%
Ka/Ks Ratio 0.18506 (Ka = 0.0667, Ks = 0.3606)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 894 bp    Location:438081..387666   Strand:-
>bmy_18169
ATGGCAACGTGGAGAGGACGCTGCGCTGGGAAGAGTCTGCTAGCGCAGCAGCCAGTGGCATCTGGCTTGTTTGTAGGACTTGGACAGAATGCTTTAGGTCTGTCTCTGGGAGCTGCAGCAGCTACTTCATCTGCAGGCAAYGAAGGCCTTGGAGGGTTAGATTTTAGCAGCTCATCGGATAAAAAGAGTGATAAAACAGGAACAAGACCAGAGAAATTTGTGAAGGAACAAAAACAAGTCCAAGAAGAAATTAGTAGAATGTCTTCCAAAGCGATGCTTAAAGTGCAGGAAGATATTAAAGCTCTGAAGCAGCTTCTGTCGCTGGCTGCCAGTGGGCTGCAGAGGAACACTCTCAGTATTGACAAACTGAAAATAGAAACTGCTCAGGAGTTAAAAAATGCTGAAATAGCTTTAAGAACCCAGAAAACACCACCTGGACTCCAACATGAAAATACAGCTCCTGCTGACTACTTCAGAATCCTGGTTCAGCAGTTTGAGGTGCAGCTCCAGCAGTACAGACAACAGATTGAAGAACTGGAAAACCATCTTGCCACCCAAGCGAACAATTCACACATCACCCCTCAAGATTTGTCAATGGCTATGCAGAAAATTTATCAAACATTTGTAGCTTTAGCTGCACAACTTCAGTCTATTCATGAAAATGTGAAGGTTCTCAAAGAACAGTACCTTGGCTACAGGAAAATGTTCTTGGGAGATSCTGTGGATGTGTTTGAAGCCAGGCGGGCAGAAGCCAAGAAGTGGCAGAACGCGCCCAGAGTCACTACCGGACCCACCCCTTTCAGCAGCATGCCAAACGCAGCAGCCGTTGCCATGGCTGCAACACTTACACAGCAGCAACAGCCTGCTACAGGTCTGAACGCATTCAAGTTATAG

Related Sequences

bmy_18169T0 Protein

Length: 298 aa      View alignments
>bmy_18169T0
MATWRGRCAGKSLLAQQPVASGLFVGLGQNALGLSLGAAAATSSAGNEGLGGLDFSSSSDKKSDKTGTRPEKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSLAASGLQRNTLSIDKLKIETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKEQYLGYRKMFLGDXVDVFEARRAEAKKWQNAPRVTTGPTPFSSMPNAAAVAMAATLTQQQQPATGLNAFKL*