Sequence detailsbmy_18180 (Coding sequence)

Part of scaffold_1681 (SequenceType object (1))

For more information consult the page for scaffold_1681 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GOPCENSTTRG00000005609 (Bottlenosed dolphin)

Gene Details

golgi-associated PDZ and coiled-coil motif containing

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005294, Bottlenosed dolphin)

Protein Percentage 98.15%
cDNA percentage 97.44%
Ka/Ks Ratio 0.19201 (Ka = 0.015, Ks = 0.0781)

GOPCENSBTAG00000016046 (Cow)

Gene Details

Golgi-associated PDZ and coiled-coil motif-containing protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000021350, Cow)

Protein Percentage 98.94%
cDNA percentage 95.59%
Ka/Ks Ratio 0.0368 (Ka = 0.0061, Ks = 0.1668)

Additional orthologs identified in other species via the OPTIC pipeline.

GOPC (Human)   Gopc (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1137 bp    Location:318975..282793   Strand:-
Raw sequence 
>bmy_18180
ATGTTCCGGTGGCTGGAGGTGCTGGAGAAGGAGTTCGACAAGGCCTTTGTGGATGTGGATCTGCTCCTGGGCGAGATCGATCCGGACCAGGCGGACATCACTTATGAGGGGAGACAGAAGATGACCAGCCTGAGCTCCTGCTTTGCGCAGCTTTGCCACAAAGCCCAGACTGTGTCCCAAATCAACCACAAGCTAGAGTCTGTCCCCTCTGTGGAGGAGCTGGAAAGAGAGCTTGAAGCAAACAAAAAAGAGAAAATGAAAGAAGCTCAACTTGAAGCTGAAGTGAAGTTGCTGAGAAAAGAGAATGAAGCCCTTCGTAGACACATAGCTGTTCTCCAGGCTGAAGTTTATGGGGCAAGACTAGCTGCCAAGTACTTGGATAAGGAACTGGCAGGAAGGGTCCAACAAATACAATTACTAGGACGAGATATGAAGGGACCTGCTCATGATAAGCTTTGGAACCAGTTGGAAGCTGAAATACATTTGCATCGTCACAAAACTGTTATCAGAGCCTGTAGAGGGCGTAATGACCTGAAGCGACCAATGCATGCACCACCAGGCCATGATCAAGACTCTTTAAAGAAAAGCCAAGGTGTTGGTCCAATTAGAAAAGTTCTCCTCCTTAAGGAAGATCATGAAGGCCTTGGCATTTCAATTACAGGTGGAAAGGAACATGGTGTTCCAATCCTCATTTCTGAGATCCACCCAGGGCAACCTGCTGATAGATGTGGAGGGCTACATGTTGGAGATGCTATCCTGGCTGTTAATGGAGTTAACCTAAGGGACACAAAGCATAAAGAAGCTGTAACCATTCTTTCCCAGCAGAGAGGAGAGATTGAATTTGAAGTAGTATATGTGGCTCCTGAAGTGGATTCTGATGATGAAAATGTGGAATATGAAGATGAGAGTGGACATCGTTACCGTTTGTACCTTGATGAGTTAGAGGGAAGTAGTAATCCTGGTGCTAGTTGCAAAGACACAAGTGGGGAAATCAAAGTGTTACAAGGATTTAATAAGAAAGCAGTAACTGATGGACATGAAAATGGAGACCTAGGAACTTCAAGTGAAACTCCACTCGAAGATGGTGCTTCTAAATTAGATGATCTGCACAGTCTGTATCATAAAAAATCTTATTAA

Related Sequences

bmy_18180T0 SequenceType object (3)

Length: 379 aa      View alignments
>bmy_18180T0
MFRWLEVLEKEFDKAFVDVDLLLGEIDPDQADITYEGRQKMTSLSSCFAQLCHKAQTVSQINHKLESVPSVEELERELEANKKEKMKEAQLEAEVKLLRKENEALRRHIAVLQAEVYGARLAAKYLDKELAGRVQQIQLLGRDMKGPAHDKLWNQLEAEIHLHRHKTVIRACRGRNDLKRPMHAPPGHDQDSLKKSQGVGPIRKVLLLKEDHEGLGISITGGKEHGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGEIEFEVVYVAPEVDSDDENVEYEDESGHRYRLYLDELEGSSNPGASCKDTSGEIKVLQGFNKKAVTDGHENGDLGTSSETPLEDGASKLDDLHSLYHKKSY*