Sequence details bmy_18210 (Coding sequence)

Part of scaffold_1716 (Scaffold)

For more information consult the page for scaffold_1716 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RPRD1A ENSBTAG00000005497 (Cow)

Gene Details

Regulation of nuclear pre-mRNA domain-containing protein 1A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000048688, Cow)

Protein Percentage 97.36%
cDNA percentage 95.45%
Ka/Ks Ratio 0.11023 (Ka = 0.0181, Ks = 0.1646)

Additional orthologs identified in other species via the OPTIC pipeline.

RPRD1A (Human)   Rprd1a (Mouse)  

Genome Location

Sequence Coding sequence

Length: 684 bp    Location:40743..50323   Strand:+
Raw sequence 
>bmy_18210
ATGACTATACCCACAGAATATACCAAACCAAACAGGAAGCTTACTTTTCTCTACCTAGCTAATGATGTCATTCAGAACAGCAAAAGGAAGGGGCCAGAGTTTACAAAAGATTTTGCACCAGTTATAGTGGAGGCTTTTAAGCATGTTTCAAGTGAAACTGATGAAAGTTGTAAGAAGCACCTTGGAAGAGTGTTATCTATTTGGGAAGAAAGGTCTGTTTATGAAAATGATGTATTAGAACAACTTAAGCAAGCTCTGTATGGCGATAAGAAGCCTAGGAAGCGAACATATGAACAGATAAAGGTGGATGAGAATGAAAACTGTTCCTCTCTAGGATCTCCAAGTGAACCACCACAGACTCTAGATCTCGTTAGAGCATTACAAGATCTAGAAAATGCAGCCTCTGGTGATGCAGCAGTTCATCAAAGGATAGCTTCTTTGCCTGTTGAAGTTCAAGAAGTATCCCTACTAGATAAAATAACAGACAAAGAATCTGGAGAAAGACTTTCTAAAATGGTAGAGGATGCTTGTATGTTGCTGGCAGATTACAATGGCAGATTGGCGGCTGAAATAGATGATAGGAAGCAACTCACTCGAATGTTAGCAGATTTTCTTCGTTGTCAAAAGGAAGCCCTTGCAGAGAAAGAGCATAAATTGGAAGTGCGTAACCTTTTCCTTATTTAG

Related Sequences

bmy_18210T0 Protein

Length: 228 aa      
>bmy_18210T0
MTIPTEYTKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKQALYGDKKPRKRTYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLDKITDKESGERLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEVRNLFLI*