Part of scaffold_1716 (Scaffold)

For more information consult the page for scaffold_1716 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GALNT1 ENSTTRG00000002916 (Bottlenosed dolphin)

Gene Details

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002734, Bottlenosed dolphin)

Protein Percentage 95.92%
cDNA percentage 96.71%
Ka/Ks Ratio 0.55579 (Ka = 0.0291, Ks = 0.0524)

GALNT1 ENSBTAG00000011206 (Cow)

Gene Details

Polypeptide N-acetylgalactosaminyltransferase 1 Polypeptide N-acetylgalactosaminyltransferase 1 soluble form

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014882, Cow)

Protein Percentage 96.26%
cDNA percentage 93.99%
Ka/Ks Ratio 0.14642 (Ka = 0.0279, Ks = 0.1908)

GALNT1  (Minke Whale)

Gene Details

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)

External Links

Gene match (Identifier: BACU001595, Minke Whale)

Protein Percentage 95.58%
cDNA percentage 96.71%
Ka/Ks Ratio 0.68401 (Ka = 0.031, Ks = 0.0453)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 885 bp    Location:356661..314917   Strand:-
>bmy_18212
ATGAGAGAAGCACTGAGCAGTAAGCCAAGAGTTCTAGAGCCAGTACAAAAGCCTCATGAAGGTCCTGGAGAAATGGGGAAACCAGTCGTCATTCCTAAAGAGGATCAAGAAAAGATGAAAGAGATGTTTAAAATCAATCAGTTCAATTTAATGGCAAGTGAGATGATTGCACTCAACAGATCTTTACCAGATGTTAGGTTAGAAGGGTGTAAAACAAAGGTGTATCCAGATAATCTTCCTACAACAAGTGTGGTGATTGTTTTCCATAATGAGGCTTGGAGCACACTTCTGCGAACTGTCCATAGTGTCATTAATCGCTCACCAAGACACATGCTAGAAGAAATTGTTCTAGTAGATGATGCCAGTGAAAGAGACTTTTTGAAAAGACCTCTAGAGAGTTATGTGAAAAAATTAAAAGTACCAGTTCACGTAATTCGAATGGAGCAACGTTCTGGATTGATCAGAGCTAGGTTAAAAGGAGCTGCAGTGTCTAAAGGCCAAGTGATCACCTTTTTAGATGCTCACTGTGAATGTACAGTGGGGTGGCTGGAGCCTCTCTTAGCCAGGATCAAACATGACAGGAAGACAGTGGTCTGTCCTATCATTGATGTGATCAGTGATGATACTTTTGAGTACATGGCAGGTTCTGACATGACCTATGGTGGATTCAACTGGAAGCTCAATTTTCGCTGGTATCCTGTTCCCCAAAGAGAAATGGACAGAAGGAAAGGTGATCGAACTCTTCCTGTGAGAACACCTACAATGGCAGGAGGCCTTTTTTCAATAGACAGAGATTACTTTCAGGAAATTGGAACATATGATGCTGGAATGGATATTTGGGGAGGAGAAAACCTAGAAATTTCCTTTAGGGTAAGTTCCCTTTGA

Related Sequences

bmy_18212T0 Protein

Length: 295 aa      View alignments
>bmy_18212T0
MREALSSKPRVLEPVQKPHEGPGEMGKPVVIPKEDQEKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMLEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLARIKHDRKTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRVSSL*