Sequence detailsbmy_18229 (Coding sequence)

Part of scaffold_1708 (SequenceType object (1))

For more information consult the page for scaffold_1708 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRDM13ENSTTRG00000004705 (Bottlenosed dolphin)

Gene Details

PR domain containing 13

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004428, Bottlenosed dolphin)

Protein Percentage 98.31%
cDNA percentage 97.6%
Ka/Ks Ratio 0.08226 (Ka = 0.0078, Ks = 0.0951)

PRDM13ENSBTAG00000006095 (Cow)

Gene Details

PR domain zinc finger protein 13

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000008009, Cow)

Protein Percentage 94.62%
cDNA percentage 93.2%
Ka/Ks Ratio 0.08265 (Ka = 0.0249, Ks = 0.3008)

Additional orthologs identified in other species via the OPTIC pipeline.

PRDM13 (Human)   Prdm13 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2298 bp    Location:111417..103855   Strand:-
Raw sequence 
>bmy_18229
GCAGTGCATGCCCGGCCGCGTCACTCCGAGGGCGGAGAACACACGTCGGGGCGCGGCTCGCCAGCTAGCGTGCGGCTCAGGCTCTGTCGCTCGCGCCCTGCCGAGGACCCAGTGCGCCCGAGCGCCTGCCTGGCGGCGGCGGCAGCAATGCACGGAGCCGCTCGCGCTCCGGCCACCAGCGTGAGTGCCGATTGCTGCATCCCGGCCGGCCTGCGCCTCGGGCCGGTGCCTGGAACCTTCAAGCTGGGCAAGTACCTGTCAGACCGCAGGGAGCCCGGGCCCAAGAAAAAGGTGCGCATGGTGAGAGGGGAGCTGGTGGACGAGTCGGGGGGCTCCCCCCTGGAGTGGATAGGGTTAATCCGGGCAGCCAGGAACCCCCAGGAACAGACTCTCGAAGCTATTGCAGACTTACCCGGAGGACAGATCTTCTACCGAGCGCTTCGAGACGTCCAGCCAGGGGAGGAGTTGACCGTGTGGTACTCCAACTCCTTGGCGCAGTGGTTTGACATCCCCACGATTGCAACTCCGACGCACGACGAGAAAGGGGAGGAGCGCTACATTTGCTGGTACTGCTGGAGGACGTTTAGATACCCCAACAGCCTTAAGGCGCACCTACGTTTCCACTGTGTGCTCAGCAGCGGCGGGGGCCGCGCCTACCTGCACCACGAGCACACGGCTCGCCAAGGCGCTGCCCCGGCCGCGGATGGCCTTCGCCTCTCCCCGAAACCCCCGGCGCCAGACTTCGCTGCGGCCGCCCCGGCGGGCACTCTTCGGGCCCACCCGCAGGTCCCGCCGGCCCTCCAGGCTTGCGGAGCGCGGGAGAGCATCAAGCGCGAGGCCTCCTCTGTGCCCTCGGCCACCTCGCCACCCCTGGCCAAGTGGGGGCCGTCCAAGAAGGGCAAGGAGCAGCCGGAGCGCATCCTGGACATGAGTGGTGCCGCCCGGGGACACGGCCACTTCCTCGGCATCGTGGGCGGTTCCCCAGCGGGGGGCGGCGGCTTGGCTTTCTATCCTGGCGTGCGCTCGGCTTTCAAGCCCGCTGGCTTGGCCAGGGCAGCCGCAGACGCGCACTGCGACCCCTACCGGGAGGAGGGCGGCGGCAAACCTGGGGCCAGCCTGGCCTTAAGCAGGCTGCTGGGAGGGGGCCGGCCGGGCGGACGCCCGGGAAGCGGGGAGAACGCGGCGGCGGGCGAAGCGGGCCATCACCATCACCACCACGCGCACCATCACCACCACCACCACCCCAAGTGCCTGCTCGCGGGGGACCCGCCGCCTCCTCCTGGCCTGCCCTGCTCCGGGGCTCTGCGCGGCTTCCCTTTGCTCCCCCGGCCCCCGGAAGAAGCTTCCGCCTTCAAGCACGTGGAGCGCGCCCCGCCCGCCGCCGCCGAGCTGCCGGGAGCGCGTTACGCGCAGTTGCCCCCGGCAGCCGGGCTGCCCCTTGAGCGCTGCGTGCTGCCCGCCCTCGACGCGGGCGGCCTCAAAGGCTACCCGGGTGGCGAGTGCAGCCACCTGCCCGCCGTCATGCCGGCCTTCACCGTCTACAACGGGGAGCTACTCTACGGCTCACCGGCCGCCGCCACTTATTACCCGCTCAAACTGCACTTCGGCGGGCTGCTCAAGTATCCGGAGTCCCTCTCTTATTTCAGTGGGCCCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGACCGCTCTGAGCCCGGCCGAGCTGAGCTCCCTGGCTAGCATCGACCGAGAGATCGCCATGCACACGCAGCAACTGTCGGAGATGGCGGCCGGGAAAGGCCGCGGCCGCCTGGACGCGGGAACGTTGCCCGCGGCCGTCGTGGCGGCGGGTGGCGCTGGGGGTTGCGGCAGCGGGGGCGGCGGCGCGGGCAAGCCCAAGACGGGCCACCTGTGCCTCTACTGCGGCAAGCTGTATTCACGCAAGTACGGGCTCAAGATCCACATGCGGACGCACACGGGCTACAAGCCGCTCAAGTGCAAAGTGTGCCTGCGGCCCTTCGGCGACCCCAGCAATCTCAACAAGCATATCCGGCTGCACGCCGAGGGCAACACGCCCTACCGCTGCGAGTTCTGCGGCAAGGTGCTGGTGCGCCGCCGGGACCTGGAGCGCCACGTCAAGTCCCGCCACCCCGGCCAGAACCTGCTGGCCAAGGCGGCCGACGGCCCGGGCGCGGAGCCTGACTACCCCCCGGAGCCGGGGGAGCCTAAGAGCGAAAACGACAGCGACGTGGACGTCTGCTTCACCGACGACCAGAGCGACCCTGAGGCCGGGGGCGGTGGCGAGCGTGACTCG

Related Sequences

bmy_18229T0 SequenceType object (3)

Length: 766 aa      View alignments
>bmy_18229T0
AVHARPRHSEGGEHTSGRGSPASVRLRLCRSRPAEDPVRPSACLAAAAAMHGAARAPATSVSADCCIPAGLRLGPVPGTFKLGKYLSDRREPGPKKKVRMVRGELVDESGGSPLEWIGLIRAARNPQEQTLEAIADLPGGQIFYRALRDVQPGEELTVWYSNSLAQWFDIPTIATPTHDEKGEERYICWYCWRTFRYPNSLKAHLRFHCVLSSGGGRAYLHHEHTARQGAAPAADGLRLSPKPPAPDFAAAAPAGTLRAHPQVPPALQACGARESIKREASSVPSATSPPLAKWGPSKKGKEQPERILDMSGAARGHGHFLGIVGGSPAGGGGLAFYPGVRSAFKPAGLARAAADAHCDPYREEGGGKPGASLALSRLLGGGRPGGRPGSGENAAAGEAGHHHHHHAHHHHHHHPKCLLAGDPPPPPGLPCSGALRGFPLLPRPPEEASAFKHVERAPPAAAELPGARYAQLPPAAGLPLERCVLPALDAGGLKGYPGGECSHLPAVMPAFTVYNGELLYGSPAAATYYPLKLHFGGLLKYPESLSYFSGPAAAAAAAAAAATALSPAELSSLASIDREIAMHTQQLSEMAAGKGRGRLDAGTLPAAVVAAGGAGGCGSGGGGAGKPKTGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCLRPFGDPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQNLLAKAADGPGAEPDYPPEPGEPKSENDSDVDVCFTDDQSDPEAGGGGERDS