Sequence detailsbmy_18233 (Coding sequence)

Part of scaffold_1708 (SequenceType object (1))

For more information consult the page for scaffold_1708 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USP45ENSTTRG00000004654 (Bottlenosed dolphin)

Gene Details

ubiquitin specific peptidase 45

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004390, Bottlenosed dolphin)

Protein Percentage 94.31%
cDNA percentage 95.84%
Ka/Ks Ratio 0.4636 (Ka = 0.0339, Ks = 0.0731)

BT.61674ENSBTAG00000018528 (Cow)

Gene Details

ubiquitin carboxyl-terminal hydrolase 45

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000037687, Cow)

Protein Percentage 88.18%
cDNA percentage 91.47%
Ka/Ks Ratio 0.43316 (Ka = 0.0708, Ks = 0.1634)

Additional orthologs identified in other species via the OPTIC pipeline.

USP45 (Human)   Usp45 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1374 bp    Location:234695..249159   Strand:+
Raw sequence 
>bmy_18233
ATGAACTTCATAGATCGTATCTTTATTGGTGAATTAACTAGCACGGTCATGTGTGAAGAATGTGCAAATATCTCCACAGTAAAAGATCCTTTTATTGATATTTCACTTCCTATAATAGAAGAAAGGGTTTCAAAACCTGTACTTTTGGGAAGAATGAGTAAATATAGAAGTTTACAGGACACAGATAATGGTCACAAGATTCTTTTCTCTGAAAACACTATCAACTTACAGAATCAACTAATTCATGGCAAAAAACGTACAAGAAAATTGTCATCTGGAGAAGATAAAGCTGTTGTCATATACCAGAAAAATGAAAACCTTGAAATGAATAGAGACTCTTCATTGTTCGCAAGCATCGTGAACACTGAGTCGACTCTGACTGAAAGCCCTACCGACAGCAGTGAACAAGAAGCCAGCCTTTCTGAAAGTAGTGTTGATGCTGACAGTGAGGCTTCAGAGTCTGAAAGTGCTCCTAAGCAGACTTTGTTGTTGAGACCCAGCAGTGGATGCTATGTGCACACAAATGGACACCTTCGCCCTCTTTCAGAGAGTGAACCACTCACCAAGGAGGGTGACGGTGGTGATGAGGGAGTGGCTGAAGCTATTTCTGAACTTCATTTGAGCAGCACTGTGACTGGAGATAGGGATTTTGACAGAGAAAATCAGCCACTAAACGTTTCGAATAATTTGTGTTTTTCAGAGGGCAGGCATATGGTGTCTTACAGCCCCCAAAATGCTTTTCAGACTCTTTCTCAGAGCTATATAACCACTTCTAAAGAATGTTCAATTCAGTCCTGTCTCTATCAGTTTACATCTATGGAATTACTAATGGGGAACAACAAGCTTCTGTGTGAGAACTGTACTGAAAAGAAACAGAAGTACCCAAAGGAAACCAGTTCTGCAGAAAAGAAAGCAGGAGGGGTTTATACTAAYGCCAGGAAGCAATTGCTCATTTCTGCTGTTCCAGCTATCCTAATTCTCCATCTTAAAAGATTTCATCAGGCTGGCTTGAGTCTTCGCAAAGTAAACAGACATGTAGATTTTCCACTGACGCTTGACTTAGCACCATTCTGTTCTGCTACTTGTAAGAATGTAAGTGTGGGAGATAAAGTTCTGTATGGTCTCTATGGCGTAGTGGAACATAGTGGCTCCATGAGAGGAGGCCACTACACCGCTTACGTGAAAGTGAGAACACCCTCCAGGAAATTACTGGAACATATCACTGGAAAGAAAAATGTACCTGGTTTGAAAGAACCTGATAGTGAATCAGCAGGCCAGTGGGTCCATGTTAGTGACACTTATGTGCAGGTGGTTCCAGAATCAAGAGCACTTAGCGCACAAGCGTACCTTCTTTTTTATGAAAGAATATTATAA

Related Sequences

bmy_18233T0 SequenceType object (3)

Length: 458 aa      View alignments
>bmy_18233T0
MNFIDRIFIGELTSTVMCEECANISTVKDPFIDISLPIIEERVSKPVLLGRMSKYRSLQDTDNGHKILFSENTINLQNQLIHGKKRTRKLSSGEDKAVVIYQKNENLEMNRDSSLFASIVNTESTLTESPTDSSEQEASLSESSVDADSEASESESAPKQTLLLRPSSGCYVHTNGHLRPLSESEPLTKEGDGGDEGVAEAISELHLSSTVTGDRDFDRENQPLNVSNNLCFSEGRHMVSYSPQNAFQTLSQSYITTSKECSIQSCLYQFTSMELLMGNNKLLCENCTEKKQKYPKETSSAEKKAGGVYTNARKQLLISAVPAILILHLKRFHQAGLSLRKVNRHVDFPLTLDLAPFCSATCKNVSVGDKVLYGLYGVVEHSGSMRGGHYTAYVKVRTPSRKLLEHITGKKNVPGLKEPDSESAGQWVHVSDTYVQVVPESRALSAQAYLLFYERIL*