Part of scaffold_1708 (Scaffold)

For more information consult the page for scaffold_1708 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PNISR ENSTTRG00000004631 (Bottlenosed dolphin)

Gene Details

PNN-interacting serine/arginine-rich protein

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004354, Bottlenosed dolphin)

Protein Percentage 99.78%
cDNA percentage 98.95%
Ka/Ks Ratio 0.02705 (Ka = 0.001, Ks = 0.0376)

BT.75868 ENSBTAG00000019730 (Cow)

Gene Details

splicing factor, arginine/serine-rich 18

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026293, Cow)

Protein Percentage 97.8%
cDNA percentage 97.21%
Ka/Ks Ratio 0.11681 (Ka = 0.01, Ks = 0.0855)

PNISR  (Minke Whale)

Gene Details

PNN-interacting serine/arginine-rich protein

External Links

Gene match (Identifier: BACU002826, Minke Whale)

Protein Percentage 99.78%
cDNA percentage 99.56%
Ka/Ks Ratio 0.05571 (Ka = 0.0009, Ks = 0.017)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1365 bp    Location:258674..282269   Strand:+
>bmy_18234
ATGCATCAGCAGCCCCCACACCCCCCTCCAGAGCAGCCATGGATGCCACCAACACCAGGCCCAATGGACATTGTTCCTCCTTCCGAAGACAGCAACAGTCAGGACAGTGGGGAATTTGCCCCTGACAACAGGCATATATTTAACCAGAACAATCACAACTTTGGTGGACCACCCGATAATTTTGCAGTGGGGCCAGTGAACCAGTTTGACTATCAGCATGGGGCTGCTTTTGGTCCACCGCAAGGTGGATTTCATCCTCCCTATTGGCAACCAGGACCTCCAGGACCTCCGGCACCTCCCCAGAATCGAAGAGAAAGGCCATCATCGTTCAGGGATCGGCAGCGCTCACCTATTGCACTTCCTGTGAAGCAGGAGCCGCCACAAATTGATGCAGTAAAACGCAGGACTCTTCCAGCTTGGATTCGAGAAGGTCTTGAAAAAATGGAACGTGAAAAGCAGAAGAAGTTGGAGAAAGAAAGAATGGAACAACAACGTTCACAATTGTCCAAAAAAGAAAAGAAGGCTGCAGAAGATGCTGAAGGAGGAGATGGCCCTCGTTTACCTCAGAGAAGTAAATTTGATAGTGATGAGGAAGATGAAGACACTGAAAATGTGGAGGCCGCAAGCAGTGGAAAAGTGACCAGAAGTCCATCTCCAGTTCCTCAAGAAGATCAAAGTGAACCAGAAATGACCGAAGAAGAGAAAGAGTATCAAATGATGTTGCTGACAAAAATGCTTCTGACTGAAATTCTACTGGATGTCACAGATGAAGAAATTTATTATGTAGCCAAAGATGCACACCGGAAAGCAACGAAAGGTGGACTGGGCGGTTACGGATCAGGAGACAGTGAAGATGAGAGGAGCGACCGAGGCTCTGAGTCATCTGACACTGATGATGAGGAATTGCGGCACCGAATCCGGCAAAAGCAGGAAGCTTTTTGGAGAAAAGAAAAAGAACAGCAGCTGTTACATGATAAACAGATGGAAGAAGAAAAGCAACAAACAGAAAGGGTTACAAAAGAGATGAATGAATTTATCCATAAAGAGCAAAATAGTTTATCACTACTAGAAGCAAGAGAAGCAGATGGTGATGTGGTTAATGAAAAGAAAAGGACTCCAAATGAAACTACACAGGATAGTAAGAAAAGTACTACCAAAGACAGTAAAAAACATTCAGGCTCTGATTCTAGTGGAAGGAGCAGTTCTGAATCTCCAGGAAGTAGCAAAGAAAAGAAGGCTAAGAAGCCTAAACATAGTCGGTCGCGATCCATGGAGAAATCTCAAAGGTCTGGTAAGAAGGCAAGCCGCAAACACAAGTCTAAGTCCCGATCAAGATCAACAACCCCTCCCCGTCGTAAACGCTGA

Related Sequences

bmy_18234T0 Protein

Length: 455 aa      View alignments
>bmy_18234T0
MHQQPPHPPPEQPWMPPTPGPMDIVPPSEDSNSQDSGEFAPDNRHIFNQNNHNFGGPPDNFAVGPVNQFDYQHGAAFGPPQGGFHPPYWQPGPPGPPAPPQNRRERPSSFRDRQRSPIALPVKQEPPQIDAVKRRTLPAWIREGLEKMEREKQKKLEKERMEQQRSQLSKKEKKAAEDAEGGDGPRLPQRSKFDSDEEDEDTENVEAASSGKVTRSPSPVPQEDQSEPEMTEEEKEYQMMLLTKMLLTEILLDVTDEEIYYVAKDAHRKATKGGLGGYGSGDSEDERSDRGSESSDTDDEELRHRIRQKQEAFWRKEKEQQLLHDKQMEEEKQQTERVTKEMNEFIHKEQNSLSLLEAREADGDVVNEKKRTPNETTQDSKKSTTKDSKKHSGSDSSGRSSSESPGSSKEKKAKKPKHSRSRSMEKSQRSGKKASRKHKSKSRSRSTTPPRRKR*