Sequence details bmy_18240 (Coding sequence)

Part of scaffold_1697 (Scaffold)

For more information consult the page for scaffold_1697 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

APOC3 ENSTTRG00000011596 (Bottlenosed dolphin)

Gene Details

apolipoprotein C-III

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010991, Bottlenosed dolphin)

Protein Percentage 84.85%
cDNA percentage 93.94%
Ka/Ks Ratio 1.40474 (Ka = 0.0705, Ks = 0.0502)

APOC3 ENSBTAG00000012398 (Cow)

Gene Details

Apolipoprotein C-III

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016453, Cow)

Protein Percentage 68.75%
cDNA percentage 84.03%
Ka/Ks Ratio 0.43212 (Ka = 0.1531, Ks = 0.3544)

Additional orthologs identified in other species via the OPTIC pipeline.

APOC3 (Human)   Apoc3 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 300 bp    Location:107792..104514   Strand:-
Raw sequence 
>bmy_18240
ATGCAGCCCCGGGTCCTCCTCGTTGCTGCCCTCCTGGTGCTCCTGGCCTCTGCCCAAGCTTCCGAGGAAGAGGATGCCTCCCTTCTGGGCAAAATGCAGGACTACATGAAGCAGGCCACCAAGACTGCCAAGGACGCACTGACCAGCGTGCAGGAGTCCCAGGTGGCCCAGCAGGCCAGAGGCTGGGTGACCGACAGCTTCAGCTCCCTGAAAGACTACTGGAGCACGTTCAAGGGCAAGTTCTCTGAATTCTGGGATTCTGCCCCGAACCACACACCGCCTCCACCTGAGGTCGCCTGA

Related Sequences

bmy_18240T0 Protein

Length: 100 aa      View alignments
>bmy_18240T0
MQPRVLLVAALLVLLASAQASEEEDASLLGKMQDYMKQATKTAKDALTSVQESQVAQQARGWVTDSFSSLKDYWSTFKGKFSEFWDSAPNHTPPPPEVA*