Sequence detailsbmy_18275 (Coding sequence)

Part of scaffold_1728 (SequenceType object (1))

For more information consult the page for scaffold_1728 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMEM106BENSTTRG00000005889 (Bottlenosed dolphin)

Gene Details

transmembrane protein 106B

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005559, Bottlenosed dolphin)

Protein Percentage 91.44%
cDNA percentage 91.96%
Ka/Ks Ratio 0.21475 (Ka = 0.0093, Ks = 0.0431)

TMEM106BENSBTAG00000019750 (Cow)

Gene Details

Transmembrane protein 106B

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000026319, Cow)

Protein Percentage 96.5%
cDNA percentage 94.29%
Ka/Ks Ratio 0.06948 (Ka = 0.0159, Ks = 0.2284)

Additional orthologs identified in other species via the OPTIC pipeline.

TMEM106B (Human)   Tmem106b (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1632 bp    Location:233572..314209   Strand:+
Raw sequence 
>bmy_18275
ATGCCCCTGGTCGAGATGAGTGAGCTCCGCAAGCCTGAGGCAGACCTTCAGGACCCAGTGGAGGCGCAGCTGTTCGAGGCTGAGGGGGAGGAGGCCGCATCCCCTTCCTCCTCCTCCTCCTCCTCCTCTTCTTACTCTGTCCTGCTCCTGGGCACCCTGGAGGAGGTGGCTGATGCTGGGGAACCCAGTCCCCCGCAGAGCCCCTCCCCCACTACCCTGGCCACCACTCCAGGGAGCCAATCTGAAGACAACGGCCTCAGCACCCAAGATGAGGAAGGGCCGAGCACCTGTCATGACCAGGAAGATGCCGTGTCCTTGTTCCAAGATGCACTACATCTGAAGGTGGCTGACCTGGTGGGGTTCCTACTGCTCAAGTATCGCACAAAGGAGCCTACCACAAAGGCAGAAATGTTGACTATCCTCAAAGATTACCAGGACCACTTCCCCGTGGTCTGCAGCCCAGTCTCCAAGTGTATGCAGCTGGTCTTTGGCCTCGACGTGAAGGAAGTGGACCCCAGCAATCACTCCTATGTCCTCGTCCCCACCCTGGGCCTCACCTCTGATGGGATGCTGAGTGACGGGCAGAGCATACCCAAGACCGGCTTCCTGGTGTTGCTCCTGGGCCTGATCCTCCTAGAGGACGACTTTGTTGCCCCTGACGAGGAGGTCTGGGGAGCACTTAGCAAGATGGGGGTGTGTGCCGGGAGGCAGCACTGTATCTATGGGGAGCCCAGGGAGCTCCTCACCAAAGTGTGGGTGCAGGAGGGCTACGTGGAGTACCGGCAGGTGCCCACAGTGACCCCGCTTGCTACGAGTTCCTGTGGGGTCCCTGGGCCCACGCAGAGACCAGCAAGCGACATGGGAAAGTCTTTTTCTCATTTGCCCTTACATTCAAATAAAGAAGATGCTTATGATGGAGTCACATCAACTGAAAATATGAGGAATGGACTGGTTAATAGTGAAGTCCATAATGAAGATGGAAGAAGTGGAGATGTCTCTCAGTTTCCATATGTGGAATTTACAGGAAGAGATAGTGTCACTTGCCCCACTTGTCAAGGAACAGGAAGAATTCCTAGGGGACAAGAAAACCAACTGGTGGCATTAATTCCATACAGTGATCAGAGATTAAGGCCAAGAAGAACAAAACTGTATGTGATGGCTTCTGTGTTTGTCTGTCTGCTTCTTTCTGGACTGGCTGTGTTTTTCCTTTTCCCTCGCTCTATCGACGTGAAATACATTGGTGTAAAATCGGCATACGTCAGTTATGATATTCAAAAGCGTACAATATATTTAAATATCACGAACACACTAAATATAACGAACAATAACTATTATTCTGTTGAAGTTGAAAACATCACTGCACAAGTTCAGTTTTCAAAAACAGTTATTGGAAAGGCACGCTTAAACAACATTACCAATATTGGTCCACTGGATATGAAACAGATTGATTATACAGTACCTACTATCATAGCAGAGGAAATGAGTTATATGTTAGTTACTGTAACAACAACTTACTTTGGACACTCAGAACAGATATCCCAGGAGAGGTACCAGTACGTTGATTGTGGAAGGAACACAACTTATCAGTTGGGGCAGTCTGAATATCTAAATGTACTTCAGCCACAACAGTGA

Related Sequences

bmy_18275T0 SequenceType object (3)

Length: 544 aa      View alignments
>bmy_18275T0
MPLVEMSELRKPEADLQDPVEAQLFEAEGEEAASPSSSSSSSSSYSVLLLGTLEEVADAGEPSPPQSPSPTTLATTPGSQSEDNGLSTQDEEGPSTCHDQEDAVSLFQDALHLKVADLVGFLLLKYRTKEPTTKAEMLTILKDYQDHFPVVCSPVSKCMQLVFGLDVKEVDPSNHSYVLVPTLGLTSDGMLSDGQSIPKTGFLVLLLGLILLEDDFVAPDEEVWGALSKMGVCAGRQHCIYGEPRELLTKVWVQEGYVEYRQVPTVTPLATSSCGVPGPTQRPASDMGKSFSHLPLHSNKEDAYDGVTSTENMRNGLVNSEVHNEDGRSGDVSQFPYVEFTGRDSVTCPTCQGTGRIPRGQENQLVALIPYSDQRLRPRRTKLYVMASVFVCLLLSGLAVFFLFPRSIDVKYIGVKSAYVSYDIQKRTIYLNITNTLNITNNNYYSVEVENITAQVQFSKTVIGKARLNNITNIGPLDMKQIDYTVPTIIAEEMSYMLVTVTTTYFGHSEQISQERYQYVDCGRNTTYQLGQSEYLNVLQPQQ*