Part of scaffold_1713 (Scaffold)

For more information consult the page for scaffold_1713 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NTF3 ENSTTRG00000010762 (Bottlenosed dolphin)

Gene Details

neurotrophin 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010181, Bottlenosed dolphin)

Protein Percentage 98.28%
cDNA percentage 97.41%
Ka/Ks Ratio 0.03898 (Ka = 0.0038, Ks = 0.0972)

NTF3 ENSBTAG00000010223 (Cow)

Gene Details

Neurotrophin-3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040469, Cow)

Protein Percentage 95.71%
cDNA percentage 92.85%
Ka/Ks Ratio 0.044 (Ka = 0.015, Ks = 0.3401)

NTF3  (Minke Whale)

Gene Details

neurotrophin 3

External Links

Gene match (Identifier: BACU003090, Minke Whale)

Protein Percentage 96.98%
cDNA percentage 98.13%
Ka/Ks Ratio 0.273 (Ka = 0.0099, Ks = 0.0361)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 948 bp    Location:102387..101440   Strand:-
>bmy_18281
ATGGATCAAAGGAGTTTGCCGGAAGACTCGCTCAATTCCCTGATTATTAAGCTGATCCAGGCAGATATTTTAAAAAACAAGCTCTCCAAGCAGATGGTGGACGTTAAGGAAAACYACCAGAGCACCCTGCCCAAARCAGAGGCCCCCCGGGAGCCCGCCAAGCCGGAATTCCAGCCCATGACGGCCATGGGCCCCGAACTGCTGCGGCATCAGAGACGCTACAACTCCCCCCGGGTCCTGCTGAGTGACAGCACCCCCATGGAGCCCCCTCCCCTGTACCTCATGGAGGATTACGTGGGCAACCCCGTGGCCTCCAACAGAACGGCGCGGAGGAAGAGGTATGCAGAGCACAAGAGCCACCGAGGGGAGTACTCCGTGTGTGACAGCGAGAGCTTGTGGGAGCCCGCCAAGCCGGAATTCCAGCCCATGACGGCCATGGGCCCCGAACTGCTGCGGCATCAGAGACGCTACAACTCCCCCCGGGTCCTGCTGAGTGACAGCACCCCCATGGAGCCCCCTCCCCTGTACCTCATGGAGGATTACGTGGGCAACCCCGTGGCCACCAACAGAACGGCACGGAGGAAGAGGTATGCAGAGCACAAGAGTCACCGAGGCGAGTACTCCGTGTGTGACAGCGAGAGCTTGTGGGTGACCGACAAGTCATCGGCCATCGACATTCGGGGACACCAGGTCACGGTGCTGGGGGAGATCAAAACCGGCAACTCTCCCGTCAAACAATATTTTTATGAGACGAGGTGTAAAGAGGCCAGGCCTGTCAAGAACGGTTGCAGAGGCATTGACGATAAACATTGGAACTCTCAATGCAAAACCTCCCAAACCTACGTCCGGGCACTGACGTCAGAAAACAACAAACTGGTCGGCTGGCGGTGGATACGGATAGACACATCCTGTGTGTGTGCCTTGTCGAGAAAAATCGGAAGAACATAA

Related Sequences

bmy_18281T0 Protein

Length: 316 aa      View alignments
>bmy_18281T0
MDQRSLPEDSLNSLIIKLIQADILKNKLSKQMVDVKENXQSTLPKXEAPREPAKPEFQPMTAMGPELLRHQRRYNSPRVLLSDSTPMEPPPLYLMEDYVGNPVASNRTARRKRYAEHKSHRGEYSVCDSESLWEPAKPEFQPMTAMGPELLRHQRRYNSPRVLLSDSTPMEPPPLYLMEDYVGNPVATNRTARRKRYAEHKSHRGEYSVCDSESLWVTDKSSAIDIRGHQVTVLGEIKTGNSPVKQYFYETRCKEARPVKNGCRGIDDKHWNSQCKTSQTYVRALTSENNKLVGWRWIRIDTSCVCALSRKIGRT*