Part of scaffold_1815 (Scaffold)

For more information consult the page for scaffold_1815 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

APEX2 ENSTTRG00000004703 (Bottlenosed dolphin)

Gene Details

APEX nuclease (apurinic/apyrimidinic endonuclease) 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004425, Bottlenosed dolphin)

Protein Percentage 93.65%
cDNA percentage 94.11%
Ka/Ks Ratio 0.26828 (Ka = 0.009, Ks = 0.0336)

APEX2 ENSBTAG00000013177 (Cow)

Gene Details

DNA-(apurinic or apyrimidinic site) lyase 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017537, Cow)

Protein Percentage 92.45%
cDNA percentage 93.04%
Ka/Ks Ratio 0.20635 (Ka = 0.0383, Ks = 0.1857)

APEX2  (Minke Whale)

Gene Details

APEX nuclease (apurinic/apyrimidinic endonuclease) 2

External Links

Gene match (Identifier: BACU012647, Minke Whale)

Protein Percentage 98.81%
cDNA percentage 99.34%
Ka/Ks Ratio 0.5994 (Ka = 0.0057, Ks = 0.0094)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1644 bp    Location:340612..333447   Strand:-
>bmy_18317
TTGCGGCACGCACAAGAACGCCTGCGCAAATGCGCGCGCGGAAGGCCAGGCCTGGCGGACTTAGTTTTCGGTTTTTTGCTCGCGCCTACGTGGGGCGCGGGCTTAAAGGCATTGCAGTTAGCTGTCAGCATGTTGCGCGTGGTGAGCTGGAACATCAATGGGATTCGGAGCCCCGTGCAAGGGGTGGGATACGAGGAGCCCAGCAATTGTACCGCCATGGCCATGGGGCGCATTTTGGACAAGCTGGATGCTGACATCGTCTGTCTTCAGGAGACCAAAGTAACCAGGGATGTGCTGACAGAGCCCCTGGCTATCATTGAGGGCTGTAACTCCTATTTCAGCTTCAGCCGCAACCGTAGTGGCTATTCTGGTGTAGCCACCTTCTGTAAGGACAGTGCTACCCCAGTGGCTGCTGAAGAAGGCCTGAGTGGCCTACTTGCCACTCAGAATGGGGACGTGGGTTGCTACGGAAACATGGATGACTTCACCCAAGAGGAGCTTCGAGCTCTGGATAGTGAGGGCCGGGCCCTCCTCACACAACACAAGATCTGCACATGGGAAGGGAAGGAGAAGACCTTGACCCTAATCAACGTGTACTGCCCCCATGCGGACCCTGGGAAGCCTGAGCGGCTCGCCTTTAAGATGCGCTTCTATCGCTTGCTGCAGATCCGAGCAGAAGCCCTCCTGGCAGCTGGCAGCCATGTTATCATTCTGGGGGACCTGAATACAGCTCACCGCCCCATTGACCACTGGGATGCAGTCAACCTGATGGACCACTTGCTCAGTAACCTGGGGTGCCAGGCTGGTTCCCATACGGGACCCTTCATTGATAGCTACCGATGCTTCCACCCAAAGCAGAAGGGGGCCTTCACCTGCTGGTCCACAGTCAGTGGCGCCCGCCATCTGAACTATGGCTCTCGGCTTGACTACGTGCTGGGGGACAGGACCCTGGTCATGGACACCTTTCAGGCCTCCTTCTTGCTGCCTGAGGTGATGGGCTCTGACCACTGCCCCGTGGGTGCAGTCTTAAGCGTGTCCTCTGTGCCGGCAAAACAGTGCCCACCTCTGTGCACCCGCTTCCTCCCTGAGTTTGCAGGCACCCAGCTCAAGATCCTTAGATTCCTAGTTCGTCTCGAACAAGATCCTGTGTTCAGGCAGTCAGCGCTGCAGCTCAGCAATCAAACACCGGTACAGATGCGCCAAAACAAAGCCCGTGTGCGCTCGACCAGGTCTCGGCCAAGTCAAGCTGGTTCCAGTAGAGGCCAAAAAAACCTGATGAGCTACTTCCAGCCATCCTCCAGTCGTCCGCAAGCTTCTCCTAACTTGGAGCTTCCTAGCCTGGGCACCCTCGTGACCCCAAAGACCTCAGAAGAGGACGTGATGGCCAATGTGGTGGAGGGGCAGGCCAAGGCTTCAGAGGCCAAGAATGAAAAGGAGGTACGGACCTCATTCTGGAAGTCTCTGCTGAGGGGGCCCTTGCCCATGCCCCTGTGCGGGGGCCACAGGGAGCCATGTGTAATGCGAACTGTGAAGAAGCCAGGACCCAACCTGGGCCGCCACTTCTACATGTGTGCCAGGCCCCAGGGTCCTCCCACTGACCCCTCCTCCCGCTGCAGCTTCTTCCTCTGGAGCAGGCCCAACTGA

Related Sequences

bmy_18317T0 Protein

Length: 548 aa      View alignments
>bmy_18317T0
LRHAQERLRKCARGRPGLADLVFGFLLAPTWGAGLKALQLAVSMLRVVSWNINGIRSPVQGVGYEEPSNCTAMAMGRILDKLDADIVCLQETKVTRDVLTEPLAIIEGCNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLATQNGDVGCYGNMDDFTQEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLAFKMRFYRLLQIRAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLMDHLLSNLGCQAGSHTGPFIDSYRCFHPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVMDTFQASFLLPEVMGSDHCPVGAVLSVSSVPAKQCPPLCTRFLPEFAGTQLKILRFLVRLEQDPVFRQSALQLSNQTPVQMRQNKARVRSTRSRPSQAGSSRGQKNLMSYFQPSSSRPQASPNLELPSLGTLVTPKTSEEDVMANVVEGQAKASEAKNEKEVRTSFWKSLLRGPLPMPLCGGHREPCVMRTVKKPGPNLGRHFYMCARPQGPPTDPSSRCSFFLWSRPN*