Sequence detailsbmy_18317 (Coding sequence)

Part of scaffold_1815 (SequenceType object (1))

For more information consult the page for scaffold_1815 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

APEX2ENSTTRG00000004703 (Bottlenosed dolphin)

Gene Details

APEX nuclease (apurinic/apyrimidinic endonuclease) 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004425, Bottlenosed dolphin)

Protein Percentage 93.65%
cDNA percentage 94.11%
Ka/Ks Ratio 0.26828 (Ka = 0.009, Ks = 0.0336)

APEX2ENSBTAG00000013177 (Cow)

Gene Details

DNA-(apurinic or apyrimidinic site) lyase 2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000017537, Cow)

Protein Percentage 92.45%
cDNA percentage 93.04%
Ka/Ks Ratio 0.20635 (Ka = 0.0383, Ks = 0.1857)

APEX2 (Minke Whale)

Gene Details

APEX nuclease (apurinic/apyrimidinic endonuclease) 2

External Links

Gene match (Identifier: BACU012647, Minke Whale)

Protein Percentage 98.81%
cDNA percentage 99.34%
Ka/Ks Ratio 0.5994 (Ka = 0.0057, Ks = 0.0094)

Additional orthologs identified in other species via the OPTIC pipeline.

APEX2 (Human)   Apex2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1644 bp    Location:340612..333447   Strand:-
Raw sequence 
>bmy_18317
TTGCGGCACGCACAAGAACGCCTGCGCAAATGCGCGCGCGGAAGGCCAGGCCTGGCGGACTTAGTTTTCGGTTTTTTGCTCGCGCCTACGTGGGGCGCGGGCTTAAAGGCATTGCAGTTAGCTGTCAGCATGTTGCGCGTGGTGAGCTGGAACATCAATGGGATTCGGAGCCCCGTGCAAGGGGTGGGATACGAGGAGCCCAGCAATTGTACCGCCATGGCCATGGGGCGCATTTTGGACAAGCTGGATGCTGACATCGTCTGTCTTCAGGAGACCAAAGTAACCAGGGATGTGCTGACAGAGCCCCTGGCTATCATTGAGGGCTGTAACTCCTATTTCAGCTTCAGCCGCAACCGTAGTGGCTATTCTGGTGTAGCCACCTTCTGTAAGGACAGTGCTACCCCAGTGGCTGCTGAAGAAGGCCTGAGTGGCCTACTTGCCACTCAGAATGGGGACGTGGGTTGCTACGGAAACATGGATGACTTCACCCAAGAGGAGCTTCGAGCTCTGGATAGTGAGGGCCGGGCCCTCCTCACACAACACAAGATCTGCACATGGGAAGGGAAGGAGAAGACCTTGACCCTAATCAACGTGTACTGCCCCCATGCGGACCCTGGGAAGCCTGAGCGGCTCGCCTTTAAGATGCGCTTCTATCGCTTGCTGCAGATCCGAGCAGAAGCCCTCCTGGCAGCTGGCAGCCATGTTATCATTCTGGGGGACCTGAATACAGCTCACCGCCCCATTGACCACTGGGATGCAGTCAACCTGATGGACCACTTGCTCAGTAACCTGGGGTGCCAGGCTGGTTCCCATACGGGACCCTTCATTGATAGCTACCGATGCTTCCACCCAAAGCAGAAGGGGGCCTTCACCTGCTGGTCCACAGTCAGTGGCGCCCGCCATCTGAACTATGGCTCTCGGCTTGACTACGTGCTGGGGGACAGGACCCTGGTCATGGACACCTTTCAGGCCTCCTTCTTGCTGCCTGAGGTGATGGGCTCTGACCACTGCCCCGTGGGTGCAGTCTTAAGCGTGTCCTCTGTGCCGGCAAAACAGTGCCCACCTCTGTGCACCCGCTTCCTCCCTGAGTTTGCAGGCACCCAGCTCAAGATCCTTAGATTCCTAGTTCGTCTCGAACAAGATCCTGTGTTCAGGCAGTCAGCGCTGCAGCTCAGCAATCAAACACCGGTACAGATGCGCCAAAACAAAGCCCGTGTGCGCTCGACCAGGTCTCGGCCAAGTCAAGCTGGTTCCAGTAGAGGCCAAAAAAACCTGATGAGCTACTTCCAGCCATCCTCCAGTCGTCCGCAAGCTTCTCCTAACTTGGAGCTTCCTAGCCTGGGCACCCTCGTGACCCCAAAGACCTCAGAAGAGGACGTGATGGCCAATGTGGTGGAGGGGCAGGCCAAGGCTTCAGAGGCCAAGAATGAAAAGGAGGTACGGACCTCATTCTGGAAGTCTCTGCTGAGGGGGCCCTTGCCCATGCCCCTGTGCGGGGGCCACAGGGAGCCATGTGTAATGCGAACTGTGAAGAAGCCAGGACCCAACCTGGGCCGCCACTTCTACATGTGTGCCAGGCCCCAGGGTCCTCCCACTGACCCCTCCTCCCGCTGCAGCTTCTTCCTCTGGAGCAGGCCCAACTGA

Related Sequences

bmy_18317T0 SequenceType object (3)

Length: 548 aa      View alignments
>bmy_18317T0
LRHAQERLRKCARGRPGLADLVFGFLLAPTWGAGLKALQLAVSMLRVVSWNINGIRSPVQGVGYEEPSNCTAMAMGRILDKLDADIVCLQETKVTRDVLTEPLAIIEGCNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLATQNGDVGCYGNMDDFTQEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLAFKMRFYRLLQIRAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLMDHLLSNLGCQAGSHTGPFIDSYRCFHPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVMDTFQASFLLPEVMGSDHCPVGAVLSVSSVPAKQCPPLCTRFLPEFAGTQLKILRFLVRLEQDPVFRQSALQLSNQTPVQMRQNKARVRSTRSRPSQAGSSRGQKNLMSYFQPSSSRPQASPNLELPSLGTLVTPKTSEEDVMANVVEGQAKASEAKNEKEVRTSFWKSLLRGPLPMPLCGGHREPCVMRTVKKPGPNLGRHFYMCARPQGPPTDPSSRCSFFLWSRPN*