Part of scaffold_1724 (Scaffold)

For more information consult the page for scaffold_1724 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TNFSF15 ENSTTRG00000015430 (Bottlenosed dolphin)

Gene Details

tumor necrosis factor (ligand) superfamily, member 15

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014621, Bottlenosed dolphin)

Protein Percentage 99.45%
cDNA percentage 98.53%
Ka/Ks Ratio 0.04921 (Ka = 0.0025, Ks = 0.0514)

TNFSF15 ENSBTAG00000018069 (Cow)

Gene Details

tumor necrosis factor ligand superfamily member 15

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000036310, Cow)

Protein Percentage 93.92%
cDNA percentage 93.55%
Ka/Ks Ratio 0.15632 (Ka = 0.0292, Ks = 0.1866)

TNFSF15  (Minke Whale)

Gene Details

tumor necrosis factor (ligand) superfamily, member 15

External Links

Gene match (Identifier: BACU007309, Minke Whale)

Protein Percentage 98.34%
cDNA percentage 99.45%
Ka/Ks Ratio 99.0 (Ka = 0.0084, Ks = 0.0001)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 546 bp    Location:41129..30693   Strand:-
>bmy_18345
ACTCCAAAAGGACAGGAGCTTGGACCTTCACATCAGCGATCTTACGCACCTCCTGGAGCCGGTGGGGATAAGCCAAGGGCACACCTGACAGTTGTGAGACAAACTCCCACGCAGTCCTTGAAAAATCAGTTCCCAGCTCTGCATTGGGAACATGAACTTGGCTTGGCCTTCACCAAGAACAGGATGAACTACACCAACAAATTCCTGGTGATTCCAGAGTCGGGAGACTACTTTGTTTACTCCCAGGTCACATTCCGAGGGACCACATCCGAGTGTGGTGAAATCAGCCAAGGGAGCCGACTAAACAAGCCAGACTCCATCATCGTGGTCATCACCAAGGTAACGGACAGCTACCCTGAGCCGACCCAGCTCCTAATGGGGACCAAGTCAGTGTGTGAAATAGGCAGCAACTGGTTCCAACCCATCTACCTAGGGGCCATGTTCTTCTTGAATGAAGGGGACAAGCTGATGGTGAACGTCAGTGACATCTCTTTGGTGGATTACACAAAAGAAGATAAAACCTTCTTCGGAGCCTTCTTGCTATAG

Related Sequences

bmy_18345T0 Protein

Length: 182 aa      View alignments
>bmy_18345T0
TPKGQELGPSHQRSYAPPGAGGDKPRAHLTVVRQTPTQSLKNQFPALHWEHELGLAFTKNRMNYTNKFLVIPESGDYFVYSQVTFRGTTSECGEISQGSRLNKPDSIIVVITKVTDSYPEPTQLLMGTKSVCEIGSNWFQPIYLGAMFFLNEGDKLMVNVSDISLVDYTKEDKTFFGAFLL*