Part of scaffold_1724 (Scaffold)

For more information consult the page for scaffold_1724 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TNFSF8 ENSTTRG00000005567 (Bottlenosed dolphin)

Gene Details

tumor necrosis factor (ligand) superfamily, member 8

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005252, Bottlenosed dolphin)

Protein Percentage 97.91%
cDNA percentage 98.6%
Ka/Ks Ratio 0.6532 (Ka = 0.0108, Ks = 0.0165)

BT.44261 ENSBTAG00000025782 (Cow)

Gene Details

tumor necrosis factor ligand superfamily member 8

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000036314, Cow)

Protein Percentage 93.72%
cDNA percentage 92.84%
Ka/Ks Ratio 0.14932 (Ka = 0.0308, Ks = 0.2062)

TNFSF8  (Minke Whale)

Gene Details

tumor necrosis factor (ligand) superfamily, member 8

External Links

Gene match (Identifier: BACU007308, Minke Whale)

Protein Percentage 98.95%
cDNA percentage 98.6%
Ka/Ks Ratio 0.15573 (Ka = 0.005, Ks = 0.0321)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 576 bp    Location:156371..132684   Strand:-
>bmy_18347
ATGCATGTGCCCGCAGGCTCCGTCACCAGCCACTTGGGAACCACTAGCCGCGGTTATTTCTGTTTCACCACAGCCTCACTGGCTCTGTGTCTCGTCTTTGCTGTGGCAACCATTATGGTGTTGGTAGTTCAGAAGACGGACTCCATCCCCCACCCGCCGGGCAAATTCCACCTTAAAGGAGTGTCAAAGCATATAAACAAAACCAAGTTGTCTTGGAACAAAGATGGCATTACCCATGGAGTCAGATATCAGGATGGGAATCTGGTGATCCAGTTCCCAGGTTGGTACTTCATCATTTGCCAACTGCAATTTCTTGTGAAATGCCCAGAACATTCTGTCGACCTGAAGCTGGAGCTTCTCATCAACAAAGATGTCAAAAAACAGACACTGGTGACAGTGTGTGAGTCTGGAGTGCAAACCAAAAACATATACCARAACCTCTCTCAGTTCTTGCTGGAGCACCTCCAGGTCAACGCCACCATATCAGTCAAGGTGGATAAATTCCAGTATGTGGATACAAACACCTTTCCTCTTGAGAATGTGTTGTCCATCTTCTTATACAGTAGTTCAGACTGA

Related Sequences

bmy_18347T0 Protein

Length: 192 aa      View alignments
>bmy_18347T0
MHVPAGSVTSHLGTTSRGYFCFTTASLALCLVFAVATIMVLVVQKTDSIPHPPGKFHLKGVSKHINKTKLSWNKDGITHGVRYQDGNLVIQFPGWYFIICQLQFLVKCPEHSVDLKLELLINKDVKKQTLVTVCESGVQTKNIYQNLSQFLLEHLQVNATISVKVDKFQYVDTNTFPLENVLSIFLYSSSD*