Part of scaffold_1747 (Scaffold)

For more information consult the page for scaffold_1747 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GCNT1 ENSTTRG00000001307 (Bottlenosed dolphin)

Gene Details

glucosaminyl (N-acetyl) transferase 1, core 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001227, Bottlenosed dolphin)

Protein Percentage 98.83%
cDNA percentage 98.44%
Ka/Ks Ratio 0.12835 (Ka = 0.0055, Ks = 0.0431)

BT.91783 ENSBTAG00000012757 (Cow)

Gene Details

beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000044098, Cow)

Protein Percentage 90.42%
cDNA percentage 92.37%
Ka/Ks Ratio 0.28269 (Ka = 0.0501, Ks = 0.1771)

GCNT1  (Minke Whale)

Gene Details

glucosaminyl (N-acetyl) transferase 1, core 2

External Links

Gene match (Identifier: BACU009513, Minke Whale)

Protein Percentage 99.3%
cDNA percentage 99.14%
Ka/Ks Ratio 0.17782 (Ka = 0.0035, Ks = 0.0198)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1290 bp    Location:367911..379828   Strand:+
>bmy_18366
ATGATGCTGAGGAAGTTGCGGAGGAGGAAACTTTTTTCTTATCCCACTAAATACTACTTCTTCCTTCTTGTTTTTTCCCTGGTCACCTTCTGTGTTTTAAGAATTCATCAAAAGCCTGAATTTGTAAATGTTGGACATTTGGAGCTGCTTGAAGAGAATCCTAGTCGTAATATTAATTGTACCAAAGTTCTACAGGGTGATGTAGATGAAATCCAAAAGGTAAAGCTTGAGATTCTAACAGTGAAATTTAGAAAACGCCCTCGATGGACAAACTATGACTACATAAACATGACCAGTGATTGTGCTTCTTTCATCAAGAAGCGCAAATATATTGTAGAACCCCTTAGTAAAGAAGAGGCAGAGTTTCCAATAGCATATTCTGTAGTGGTTCATCACAAAATTGAAATGCTTGACAGGCTCCTGAGGGCCATTTATATGCCTCAGAATTTCTATTGCATTCACGTGGATACAAAATCAGAGGAATCCTTTTTGGCCGCAGTGATTGGCATTGCGTCCTGTTTCAGTAATGTCTTCGTGGCCAGTCAGCTGGAGAGTGTTGTGTATGCATCTTGGAGCCGGGTTCAGGCTGACCTCAACTGCATGCAGGACCTCTACCGAATGAACGCAGACTGGAAGTACTTGATAAATCTCTGCGGTATGGATTTTCCTATTAAAACCAACCTGGAAATTGTCAGGAAGCTCAAGTCGTTAATGGGCGAGAACAACCTAGAAACGGAGAGAATGCCATCCAATAAAAAAGAAAGGTGGAAAAAGCATTATGCAGTCGTGAATGGAAAGCTGACAAACATGGGGACCGACAAAATACATCCTCCTCTTGAAACACCTCTGTTTTCAGGCAGTGCCTATTTTGTGGTCAGTAGGAGGTATGTGGAGTATGTGCTCGAGAATGAAAAAATACAAAAGTTTATGGAGTGGGCAAAAGACACATACAGCCCGGACGAGTATCTCTGGGCCACTATTCAGAGGATCCCCGAAGTCCCAGGGTCACTGTCCTTAAGCCATAAGTACGACATGTCCGACATGCACGCGATTGCCAGGTTTGTCAAGTGGCAGTACTTTGAAGGTGACATTTCCAAGGGCGCCCCCTACCCGCCGTGCAGCGGCGTCCATGTGCGCTCCGTGTGCGTTTTCGGAACGGGTGACTTGAACTGGATGTTGCGCGTGCACCACTTGTTCGCCAACAAGTTCGACACGGACATCGACCTCTTTGCCATCCAGTGTTTGGATGAGCATCTGAGGCATAAGGCCCTGGAGACATTAAAACACTGA

Related Sequences

bmy_18366T0 Protein

Length: 430 aa      View alignments
>bmy_18366T0
MMLRKLRRRKLFSYPTKYYFFLLVFSLVTFCVLRIHQKPEFVNVGHLELLEENPSRNINCTKVLQGDVDEIQKVKLEILTVKFRKRPRWTNYDYINMTSDCASFIKKRKYIVEPLSKEEAEFPIAYSVVVHHKIEMLDRLLRAIYMPQNFYCIHVDTKSEESFLAAVIGIASCFSNVFVASQLESVVYASWSRVQADLNCMQDLYRMNADWKYLINLCGMDFPIKTNLEIVRKLKSLMGENNLETERMPSNKKERWKKHYAVVNGKLTNMGTDKIHPPLETPLFSGSAYFVVSRRYVEYVLENEKIQKFMEWAKDTYSPDEYLWATIQRIPEVPGSLSLSHKYDMSDMHAIARFVKWQYFEGDISKGAPYPPCSGVHVRSVCVFGTGDLNWMLRVHHLFANKFDTDIDLFAIQCLDEHLRHKALETLKH*