Part of scaffold_1745 (Scaffold)

For more information consult the page for scaffold_1745 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RAB39A ENSTTRG00000003143 (Bottlenosed dolphin)

Gene Details

RAB39A, member RAS oncogene family

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002946, Bottlenosed dolphin)

Protein Percentage 97.16%
cDNA percentage 98.82%
Ka/Ks Ratio 1.12776 (Ka = 0.0123, Ks = 0.0109)

RAB39A ENSBTAG00000018246 (Cow)

Gene Details

ras-related protein Rab-39A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024288, Cow)

Protein Percentage 70.37%
cDNA percentage 73.77%
Ka/Ks Ratio 0.50547 (Ka = 0.2754, Ks = 0.5448)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 723 bp    Location:7569..1055   Strand:-
>bmy_18374
ATGGTGAAAAAAGGCACTCACAAGGCTAATGCATTCACAGGCTGCTTGCTGCCAACAGCCTTTGTCATCAAAGTACTTCCATCTTCTAAATACCTATTTGGCAATTGGCAAAGCCACAAGAAGGGCATTTCCAGTGGACCATCTGGCTCATTTTACCCAAGGAGGCCTATCTACCTTGTTCTTTTAAGGTCTGTTCCCTGCCTCCTTAAAATACCTTCAAGACCTTCTGAAGACCTAAGTGTCTCGACCCAAGAGAGGAAGTTCCAGAGAAAGATAGATGTTCCCTCATCATCTCTATCAATAACTCGATCTTATTACCGCAACTCGGTTGGTGGATTTTTAGTATTTGACATTACTAACCGACGATCTTTTGAACATGTGAAAGATTGGCTAGAAGAAGCAAAAATGCATGTACAGCCATTTCAGATTGTATTTCTGCTAGTGGGACATAAATGTGATTTAGCTTCACAACGTCAAGTTACAAGGGAAGAAGCTGAAAGACTGTCAGCAGACTGTGGTATGAAGTATATAGAAACCTCAGCAAAAGATGCTACAAATATTGAGGAATCCTTCACTATCTTGACAAGAGACATATATGAGCTTATTAAAAGGGGAGAAATTTGTATTCAGGATGGCTGGGAAGGGGTTAAAAGTGGTTTCGTTCCTAATACTGTGCATTCTTCTGAGGAAGCAGTAAAACCCAGGAAAGAGTGCTTCTGCTGA

Related Sequences

bmy_18374T0 Protein

Length: 241 aa      View alignments
>bmy_18374T0
MVKKGTHKANAFTGCLLPTAFVIKVLPSSKYLFGNWQSHKKGISSGPSGSFYPRRPIYLVLLRSVPCLLKIPSRPSEDLSVSTQERKFQRKIDVPSSSLSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMHVQPFQIVFLLVGHKCDLASQRQVTREEAERLSADCGMKYIETSAKDATNIEESFTILTRDIYELIKRGEICIQDGWEGVKSGFVPNTVHSSEEAVKPRKECFC*