Sequence detailsbmy_18388 (Coding sequence)

Part of scaffold_1759 (SequenceType object (1))

For more information consult the page for scaffold_1759 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLEC4FENSTTRG00000011319 (Bottlenosed dolphin)

Gene Details

C-type lectin domain family 4, member F

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010731, Bottlenosed dolphin)

Protein Percentage 84.39%
cDNA percentage 87.99%
Ka/Ks Ratio 0.75212 (Ka = 0.0774, Ks = 0.103)

CLEC4FENSBTAG00000004560 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000005991, Cow)

Protein Percentage 74.91%
cDNA percentage 86.43%
Ka/Ks Ratio 0.73797 (Ka = 0.1417, Ks = 0.192)

CLEC4F (Minke Whale)

Gene Details

C-type lectin domain family 4, member F

External Links

Gene match (Identifier: BACU006030, Minke Whale)

Protein Percentage 86.71%
cDNA percentage 89.15%
Ka/Ks Ratio 0.5289 (Ka = 0.0991, Ks = 0.1874)

Additional orthologs identified in other species via the OPTIC pipeline.

CLEC4F (Human)   Clec4f (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1809 bp    Location:163071..151631   Strand:-
Raw sequence 
>bmy_18388
ATGAGGGGTGACGAGGTCCGCTTCTGCACAGGCAACCAGAGCGTCTCCCTGTGCTCCCGAGGGCTGGACCCTGGGGCAGTGGCTCCTGCAGCCCCCAAGATGTCAAGGCGTTTGCAGGCCACCCTGGCCGTTGTGGCTGTGACCGTGGTCTCCTCTCTTGTGGCTCTCTTCGTTGTGGCTCTACAGCACCCAAGACCTTCACTGGAGGCATACGCCTCCCTCCAAGAGTTTCCGGAAGACAACAGTACTGGGCAGTTCCACAAGGCACCCGACTATCCCTACCACTTTGGCAGGGGGGCAGAGCTGCAAGAGGCTATCCAGATGTTTAAAGGGCACGTGGAGAATTCCAGCACCTGGAGCGTGGAGATCCAGATGTTGACGTGCAGAGTGGACAATGTCAGTTCTCAGATCCAGACGCTCGGTGGTCATCTGGAAAGTGCCAGTGCTGACCTCCAGATGGTAAAAGGCATCTTAAAGGATGCCAGCACCTTGAGTTTCCAGACCCAGATGTTAAGAAGTTCCTTGGAGGGGACCACTTCTGAGATGCAGAAGCTAAAGGGAGATCTGGAAGAGACACAAGCTTCACATTCCCAGATCCAGAGTTTCTTAAAAAGCAGTTTAGAAAACACTAGCACTGAGCTCCATATGTTAAGCAGAGGCTTAGAAAATGCAAACACGGAGATCCAGGTGTTGAAGGCAGGGTTAGAAATGGCAAATGCTCAGGTCCGATTGGCAAACAGTAGTTTAAAGAATGTTAATGCCCAGATCCATGGTTTGAGAGGCAGTCTGGATAGTGTCAATGATTTAAGGGCCCAGCAGAAAGTTTTAAGAAGTAGTTTGGAAGGTGCTACTGCTGAGATGCAGAAGCTAAAGGGAAGTCTGCAAAATACAAATGCTTTAAACTCCCAGACCCAGACTTTTATAAAAGGCAGTTTAGGCAACACCAGTGCTGAGATTCAGGTACTAAGAGGTCATTTGGAAAGGGCTGGCGATGAGATTCGCCTGTTAAAAAGAGATTTAGAAACTGTCACTGCCCAGACCCAAACAGTAAATGGTCGCCTGGAGCAGACAGACGCTCAGATGCGAGTATTAAAAACAGAGCTAGAAAGCGCCATTGCCTTAAGTTCCAAGATTCAGGTGTTAGACGGTCTTTTGAGAAACGCCAGCCGAGAGATACAGACCCTAAAACAAGGAATGAAGGATGCTGCGGCCTTAAATTCCAAGACCSGGATGTTAGAGAGAAATCTGCAGGAGGCCAGAGCTGAGGTCCACAGGTTGAAAGAGGATTTGGAGAACACCAAAGCACTGACTGCGAAAATCCAGGAGGAGCAGGGTAGCCTGGAGACCCTCCGCGCAACCTCTGCTTCGCAGGAGCAGCTCCAGAGGACCCAAAATCAACTCCTCCAGCTGATCCTGCAAGGCTGGAAGTCCTACAGTGGGAGCTTGTATTACTTTTCTCATGCCAAGAAGACTTGGCAGGAGGCTGAGCAGTTCTGTGTGTCCCAGGGAGCCCACCTGGCCTCGGTGACCTCTGAGGAGGAGCAGGCATTCCTGATACAGTTCACGAGTGCCTCTTACCACTGGATTGGCCTCACTGACAGCGGTTTGCAGGGCTTCTGGCGCTGGGCAGATGGCACACCATTTAATAGTGCCAGGAGCAGTGCGTTTTGGGACAAGAATCAGCCGGACAACTGGCGACACGGGAATGGGCTTACGGAAGACTGTGTCCACATGCAGCGGAAGTGGAATGACATGTACTGTACCGCCCTCTACCACTGGGTCTGCAAGAAGCCCGTGGGCCGGATGTAG

Related Sequences

bmy_18388T0 SequenceType object (3)

Length: 603 aa      View alignments
>bmy_18388T0
MRGDEVRFCTGNQSVSLCSRGLDPGAVAPAAPKMSRRLQATLAVVAVTVVSSLVALFVVALQHPRPSLEAYASLQEFPEDNSTGQFHKAPDYPYHFGRGAELQEAIQMFKGHVENSSTWSVEIQMLTCRVDNVSSQIQTLGGHLESASADLQMVKGILKDASTLSFQTQMLRSSLEGTTSEMQKLKGDLEETQASHSQIQSFLKSSLENTSTELHMLSRGLENANTEIQVLKAGLEMANAQVRLANSSLKNVNAQIHGLRGSLDSVNDLRAQQKVLRSSLEGATAEMQKLKGSLQNTNALNSQTQTFIKGSLGNTSAEIQVLRGHLERAGDEIRLLKRDLETVTAQTQTVNGRLEQTDAQMRVLKTELESAIALSSKIQVLDGLLRNASREIQTLKQGMKDAAALNSKTXMLERNLQEARAEVHRLKEDLENTKALTAKIQEEQGSLETLRATSASQEQLQRTQNQLLQLILQGWKSYSGSLYYFSHAKKTWQEAEQFCVSQGAHLASVTSEEEQAFLIQFTSASYHWIGLTDSGLQGFWRWADGTPFNSARSSAFWDKNQPDNWRHGNGLTEDCVHMQRKWNDMYCTALYHWVCKKPVGRM*