Sequence detailsbmy_18397 (Coding sequence)

Part of scaffold_1762 (SequenceType object (1))

For more information consult the page for scaffold_1762 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USP11ENSTTRG00000013711 (Bottlenosed dolphin)

Gene Details

ubiquitin specific peptidase 11

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013010, Bottlenosed dolphin)

Protein Percentage 95.26%
cDNA percentage 96.0%
Ka/Ks Ratio 0.32582 (Ka = 0.0112, Ks = 0.0345)

USP11ENSBTAG00000016772 (Cow)

Gene Details

ubiquitin carboxyl-terminal hydrolase 11

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022310, Cow)

Protein Percentage 91.32%
cDNA percentage 92.32%
Ka/Ks Ratio 0.19548 (Ka = 0.0443, Ks = 0.2266)

Additional orthologs identified in other species via the OPTIC pipeline.

USP11 (Human)   Usp11 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2955 bp    Location:83365..67290   Strand:-
Raw sequence 
>bmy_18397
ATGAGAGGAGGGCGAACGGCCATGGCGGCGGTCGCAGAGAGTCCGGCGGCTGCGGCTGCGGCCGAGGACCGAGAGCCACAGCGTGAAGCGGTGCCGGGCCTGGAGAGCCAGCGGCGCCAGATCGAGAACAGCGAGAATGGGCGAGGGCCTCCGCTGCGGGCGGGCGAAAGCTGGTTCCTCGTGGAGCAGCACTGGTACAAGCAGTGGGAAGTACACGTGCAGGGAGGAGGCCAGGACCCCAGCACCTTCCCTGGCTGCATCAACAATGCTGAGCTCTTTGAAGACCAGGTAAACTGGCGCCTCAAGAAGGGACTGGTGGAAGGTGAGGACTATGTGCTGCTCCCAGCGGCTGCTTGGCATTACCTGGTCAACTGGTATGGTCTAGAGCATGGCCAGCCTCCCATTGAACGCAAGGTCATTAGACGGTATCTTGCTGTGTCCCCTGCATTTGCTCGCCTGTGCATGCTCCCCTCACAGAACCTCGTCGTGGAGCTGTCCAGCATCCAGAAGGTTGAAGTGTACCCAGTAGAACTGCTGCTCATCCAGCACAGTGATATGGACACAGCTCACACCGCTCAATTCAACCGCACAGATTCTATTGGTGAGTCTAAGGGTCGCGGAATGAGTTGGCATTCCCAGCCACGGTCACAGCTCGGTGACCTAAGGAGTCTGATGCCAAGATGGATGGATCCTCCAGGGTTCCAGGAAGACCTTGAATGTGCCCCATCACCCTCCACAGACCTAGTCCTGCGCACCGCTCAAGAGCAGTTTCTGGTGAGCCCCCAGGAAGAGACACGGCTGTGGATCAAGAACGCGGAGGGCTCTTTTGAGAGGTTGTGCAACACACGTGTCACGGTGCTTGACGCCGCTCTCCAGACTGGGCAGGTGGTCATCATGGAGACCCGAAACAAGGATGGCACTTGGCCCAGCGCACAGCTGCCCGCCATGAGCAGCACGTCGGAGGAGGATGAGGACTTCCAGGGCCAGCCGGGCATCTGTGGTCTCACCAATCTGGGCAACACGTGCTTCATGAACTCGGCCCTGCAGTGCCTCAGCAACGTGCCACAGCTCACCAACTACTTCCTCAAAAACCGCTACCTGGAGGAGCTCAACTTCTGCAACCCGCTGGGCATGAAGGGGGAGATTGCAGAGGCCTATGCGGACCTGGTGAAGCAGGCGTGGTCCGGCCACCACCGCTCCATCGTGCCCCACGTGTTCAAGACCAAGGTCGGCCACTTTGCGTCCCAGTTTCTGGGCTACCAGCAGCATGACTCACAGGAGCTGCTGTCGTTCCTCCTGGATGGGCTGCACGAGGACCTCAATCGTGTTAAGAAGAAGGAATATGTGGAACTGTGCGATGCTGCTGGGAGGCCAGATCAGGAGGTTGCTCAGGAGGCCTGGCAGAACCACAAACGGCGGAACGATTCTGTGATTGTGGACACTTTCCATGGCCTCTTCAAGTCCACGGTGGTGTGCCCTGATTGTGGCAACGTGTCTGTGACCTTCGACCCCTTCTGCTACCTCAGTGTCCCACTGCCTGTGACCCACAAGAGGGTCATGGAGGTCTTCTTTGTCTCCATGGACCCCCGCCGCAAGCCAGAGCAGCACCGGCTCGTGGTCCCCAAGAGAGGCAAGATCTCGGATCTGTGTGTGGCTCTGGCCAAACACACTGGTGTCTCGCCAGAAAGGATGATGGTGGCCGATGTCTTCAGTCACCGCTTCTATAAGATCTACCAGCTGGAGGAGTCTCTGAGCAGCATCTTGGACCGAGATGATATCTTCATATACGAGGTGTCAGGCAGGGCTGCTATTGGCGAGAACTCCAGAGAGGACGTTGTGCTTCCTATCTACCTGCGGGAGCGCACCCCAGCCCGGGACTACAACAATTCTTACTATGGCCTGATGCTCTTTGGGCACCCGCTCCTGGTGTCGGTGCCCCGGGACCGGCTCTCCTGGGACGCCCTACGCTATGTGACCAGACCCAGCTCGGATGACGAGGATGATGGGGATGAGAAAGCAGACCTGGAGGATAAGGACAACCTCCCTAAGCCTGGACATGTGGCTGGGGGCAGCTCCCAAGACCCTGGGCCGGAGCAGGCTGGGCCCAGCTCTGGAGTCGCGGGCGGGAGCCGGGCCCCCGTGGACAACTCCCCTGGACCATCTCACTGGCCCCAGAGAGCACGGCGCAAGCACCTCTTCACCCTGCAGACAGTGAATTCCAATGGGACCAGCGACCGCTCGACCTTCAACGAGGATACCCATGGTGTCTCCTTCAGCTCCCAGCCGTACATTGCCATCGACTGGGAGCCAGAGATGAAGAAGCGTTACTATGACGAGGTGGAGGCTGAGGGCTATGTGAAGCATGACTGCGTTGGGTACGTGCTGAAGAAGGCTCCGGTGCGGCTGCAGGAGTGCATCGAGCTCTTCACCACCACTGAGACCCTGGAGAAGGAAAACCCCTGGTACTGCCCCAATTGCAAGCAGCACCAGCTGGCCACCAAGAAGCTGGACCTGTGGATGCTGCCGGAGACGCTCATCATCCACCTGAAGCGCTTTTCCTACACCAAGTTCTCCCGCGAGAAGCTGGATACCCTTGTGGAGTTTCCTATCCGGGACCTGGACTTCTCCAAGTTTGTCATCAAGCCGCAGAACAAGTCGGCCCCAGAGCTGTACAAATATGATCTCATCGCAGTTTCCAACCATTACGGGGGCCTGCGGGATGGACACTACACGACATTTGCCTGCAACAAGGACAGCGGTCAATGGCACTACTTCGATGACAACAGTGTCTCACCTGTGACTGAGAATCAGATTGAGTCCAAGGCAGCCTATGTCCTCTTCTACCAACGCCAGGATGTGGCACGTCGCCTGCAACCCCAGCCCAGCTTATCTGACCCCCCAGCATCCCCAGCCTGTGGTACCCCAGCCAACTTTGAGTTCATGGATATAAACTGA

Related Sequences

bmy_18397T0 SequenceType object (3)

Length: 985 aa      View alignments
>bmy_18397T0
MRGGRTAMAAVAESPAAAAAAEDREPQREAVPGLESQRRQIENSENGRGPPLRAGESWFLVEQHWYKQWEVHVQGGGQDPSTFPGCINNAELFEDQVNWRLKKGLVEGEDYVLLPAAAWHYLVNWYGLEHGQPPIERKVIRRYLAVSPAFARLCMLPSQNLVVELSSIQKVEVYPVELLLIQHSDMDTAHTAQFNRTDSIGESKGRGMSWHSQPRSQLGDLRSLMPRWMDPPGFQEDLECAPSPSTDLVLRTAQEQFLVSPQEETRLWIKNAEGSFERLCNTRVTVLDAALQTGQVVIMETRNKDGTWPSAQLPAMSSTSEEDEDFQGQPGICGLTNLGNTCFMNSALQCLSNVPQLTNYFLKNRYLEELNFCNPLGMKGEIAEAYADLVKQAWSGHHRSIVPHVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKKKEYVELCDAAGRPDQEVAQEAWQNHKRRNDSVIVDTFHGLFKSTVVCPDCGNVSVTFDPFCYLSVPLPVTHKRVMEVFFVSMDPRRKPEQHRLVVPKRGKISDLCVALAKHTGVSPERMMVADVFSHRFYKIYQLEESLSSILDRDDIFIYEVSGRAAIGENSREDVVLPIYLRERTPARDYNNSYYGLMLFGHPLLVSVPRDRLSWDALRYVTRPSSDDEDDGDEKADLEDKDNLPKPGHVAGGSSQDPGPEQAGPSSGVAGGSRAPVDNSPGPSHWPQRARRKHLFTLQTVNSNGTSDRSTFNEDTHGVSFSSQPYIAIDWEPEMKKRYYDEVEAEGYVKHDCVGYVLKKAPVRLQECIELFTTTETLEKENPWYCPNCKQHQLATKKLDLWMLPETLIIHLKRFSYTKFSREKLDTLVEFPIRDLDFSKFVIKPQNKSAPELYKYDLIAVSNHYGGLRDGHYTTFACNKDSGQWHYFDDNSVSPVTENQIESKAAYVLFYQRQDVARRLQPQPSLSDPPASPACGTPANFEFMDIN*