Part of scaffold_1844 (Scaffold)

For more information consult the page for scaffold_1844 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GABRA1 ENSTTRG00000016783 (Bottlenosed dolphin)

Gene Details

gamma-aminobutyric acid (GABA) A receptor, alpha 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015912, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 98.99%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0308)

GABRA1 ENSBTAG00000030286 (Cow)

Gene Details

Gamma-aminobutyric acid receptor subunit alpha-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009483, Cow)

Protein Percentage 99.54%
cDNA percentage 95.59%
Ka/Ks Ratio 0.01315 (Ka = 0.0022, Ks = 0.1676)

GABRA1  (Minke Whale)

Gene Details

gamma-aminobutyric acid (GABA) A receptor, alpha 1

External Links

Gene match (Identifier: BACU003711, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.23%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0192)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1296 bp    Location:52154..106910   Strand:+
>bmy_18406
TATGGACAACCCTCATTACAAGATGAACTTAAAGACAACACCACTGTCTTCACTAGGATTTTGGACCGACTCCTAGATGGTTATGACAATCGCCTGAGACCAGGATTGGGAGAGCGTGTAACTGAAGTGAAGACTGACATCTTCGTCACCAGTTTCGGACCCGTTTCAGACCATGATATGGAATATACAATAGATGTATTCTTCCGTCAAAGCTGGAAGGATGAAAGGTTAAAATTTAAAGGACCCATGACGGTACTCCGGTTAAATAACCTGATGGCAAGTAAAATCTGGACTCCGGATACCTTTTTCCACAATGGAAAGAAATCAGTGGCACACAACATGACCATGCCCAACAAGCTCCTACGGATCACGGAGGATGGGACCTTGTTGTACACCATGAGGCTGACGGTGAGAGCTGAATGTCCAATGCATTTGGAGGATTTCCCTATGGATGCCCATGCCTGCCCACTAAAATTTGGGAGCTATGCTTACACGAGAGCGGAAGTTGTTTATGAGTGGACCAGAGAGCCGGCACGCTCAGTGGTTGTAGCAGAAGATGGGTCACGCCTGAACCAGTACGATCTTCTTGGACAAACAGTAGACTCTGGGATTGTTCAGTCTAGCACAGGAGAATATGTTGTTATGACCACTCATTTCCACCTGAAGAGAAAGATTGGCTATTTTGTTATTCAAACATACCTGCCATGCATAATGACGGTTATTCTCTCCCAAGTCTCSTTCTGGCTCAACAGAGAGTCTGTACCAGCAAGGACTGTCTTTGGAGTAACAACTGTGCTCACCATGACAACTTTGAGTATCAGTGCCAGAAATTCCCTCCCTAAGGTGGCTTATGCAACTGCTATGGATTGGTTTATTGCAGTGTGCTATGCCTTTGTATTCTCAGCTCTAATTGAGTTTGCCACAGTAAACTATTTCACCAAAAGAGGTTATGCATGGGATGGCAAAAGTGTGGTTCCAGAAAAGCCAAAGAAAATGAAGGATCCTCTCATTAAGAAAAACAACACTTATGCTCCGACAGCAACCAGCTACACACCTAATTTGGCCAGGGGTGACCCCGGCTTAGCCACCATTGCTAAAAGTGCAACCATAGAACCAAAAGAAGTCAAGACGGAGACAAAACCACCAGAACCGAAGAAAACCTTTAACAGTGTCAGCAAAATTGACCGACTGTCAAGAATAGCCTTCCCGCTGTTATTYGGAATCTTTAACTTGGTCTATTGGGCTACATATTTAAACAGAGAGCCTCAGCTAAAAGCCCCTACCCCACATCAATAG

Related Sequences

bmy_18406T0 Protein

Length: 432 aa      View alignments
>bmy_18406T0
YGQPSLQDELKDNTTVFTRILDRLLDGYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKMKDPLIKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKTETKPPEPKKTFNSVSKIDRLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ*