Part of scaffold_1771 (Scaffold)

For more information consult the page for scaffold_1771 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CAPRIN1 ENSTTRG00000007738 (Bottlenosed dolphin)

Gene Details

cell cycle associated protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007321, Bottlenosed dolphin)

Protein Percentage 94.24%
cDNA percentage 95.0%
Ka/Ks Ratio 0.40915 (Ka = 0.0398, Ks = 0.0973)

BT.69966 ENSBTAG00000016744 (Cow)

Gene Details

caprin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022266, Cow)

Protein Percentage 92.38%
cDNA percentage 92.71%
Ka/Ks Ratio 0.31333 (Ka = 0.0514, Ks = 0.1641)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1971 bp    Location:83402..120190   Strand:+
>bmy_18411
ATGCCCTCGGCCACCAGCCACAGCGGAAGCGGCAGCAAGTCGTCCGGACCGCCACCTCCTTCGGGTTCCACCGGGAGTGAGGCTGGGGCCGGGGCCGCCGCGCCGGCTTCTCAGCACCCCACGACCGGCACCGGCGCTGTCCAGACCGAGGCCATGAAGCAGATTCTCGGGGTGATCGACAAGAAACTTCGGAACCTGGAGAAGAAAAAGGTAAGCCCCAAATACACTTTTGCCAGTCTCTACTCAAATTTGGGCAAGCTTGATGATTATCAGGAACGAATGAACAAAGGGGAAAGGCTTAATCAAGATCAGCTGGATGCTGTATCTAAGTACCAGGAAGTCACAAATAACTTGGAGTTTGCAAAAGAATTACAGAGGAGTTTCATGGCATTAAGCCAAGATATTCAGAAAACAATAAAGAAGACAGCACGTCGGGAGCAGCTTATGAGAGAAGAAGCTGAACAGAAACGTTTAAAAACTGTGCTTGAGCTGCAGTATGTTTTGGACAAATTGGGAGATGACGAAGTGAGAACTGACCTGAAGCAAGGTTTGAATGGAGTGCCAATATTGTCTGAAGAGGAATTGTCGTTGTTGGATGAGTTCTACAAATTAGCAGACCCTGAACGGGACATGAGCTTGAGGTATAGTGATAAAGCTCTAAAGGAAATTGTTGAGCGTGTTTTCCAGTCAAACTACTTTGACAGCACTCACAACCACCAGAATGGGCTGTGTGAGGAAGAAGAGGCAGCCTCAGCACCTGCAGTTGAAGACCAGGTAGCTGAAGCTGAACCTGAGCCTGCAGAAGAATACACTGAACAAAGTGAAGTTGAATCAACAGAGTATGTAAATAGACAATTTATGGCAGAAACACAGTTCAGCAGTGGTGAAAAGGAGCAGGTAGATGAGTGGACAGTTGAAACAGTTGAGGTGGTAAATTCACTCCAGCAGCAACCTCAGGCTGCATCTCCTTCAGTACCAGAGCCCCACTCTTTGACCCCAGTGGCTCAGGCAGATCCCCTCGTGAGAAGACAGCGAGTACAGGACCTTATGGCGCAAATGCAGGGGCCCTATAATTTCATACAGGATTCAATGCTGGATTTTGAAAACCAGACCCTTGATCCTGCCATTGTATCTGCACAGCCTATGAATCCAGCACAGAACATGGACATACCCCAGCTGGTTTGCCCTCCAGTTCATTCTGAATCTAGACTTGCTCAACCTAATCAAGTTTCTGTACAACCAGAAGCTACACAGCTTATGAAAACCAGGTTCCTTTGGTTTCATCCACAAGTGAGGGATATACAGCATCTCAACCCTTGTACCAGCCTTCTCATGCTACTGAGCAACGACCGCAAAAGGAACCAATTGACCAGATTCAGGCAAGTTCTGTTACCAGGTCATGTAAACTTGATGAGGCAATTATACATGAATTGGGTGGAGGCAACAATCTCTTTAAATACAGACCAGACTACAGCATCATCATCCCTTCCTGCTGCTTCTCAGCCTCAGGTGTTCCAGGCTGGGACAAGCAAACCTTTACATAGCAGTGGAATCAATGTAAATGCAGCTCCATTCCAATCCATGCAAACGGTGTTCAATATGAATGCCCCAGTTCCTCCTGTTAATGAACCAGAAACTTTAAAACAGCAAAATCAGTACCAGACCAGTTATAACCAGAGCTTTTCCAGTCAGCCTCACCAAGTAGAACAAACAGAGCTTCAGCAAGAACAGCTTCAAACAGGAGGATATGATGGTTACCGCGCTTCATTCTCTAACACTCCAAACAGTGGATATACACAGTCTCAGTTCAGTGCTCCCCGGGACTACTCTGGCTATCAGCGGGATGGATATCAGCAGAATTTCAAGCGAGGCTCTGGGCAGAGTGGACCACGGGGAGCCCCACGAGGTCGTGGAGGGCCCCCAAGACCCAACAGAGGGATGCCGCAAATGAACACTCAGCAAGTGAATTAA

Related Sequences

bmy_18411T0 Protein

Length: 657 aa      View alignments
>bmy_18411T0
MPSATSHSGSGSKSSGPPPPSGSTGSEAGAGAAAPASQHPTTGTGAVQTEAMKQILGVIDKKLRNLEKKKVSPKYTFASLYSNLGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALSQDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSEEELSLLDEFYKLADPERDMSLRYSDKALKEIVERVFQSNYFDSTHNHQNGLCEEEEAASAPAVEDQVAEAEPEPAEEYTEQSEVESTEYVNRQFMAETQFSSGEKEQVDEWTVETVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQDLMAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPAQNMDIPQLVCPPVHSESRLAQPNQVSVQPEATQLMKTRFLWFHPQVRDIQHLNPCTSLLMLLSNDRKRNQLTRFRQVLLPGHVNLMRQLYMNWVEATISLNTDQTTASSSLPAASQPQVFQAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQYQTSYNQSFSSQPHQVEQTELQQEQLQTGGYDGYRASFSNTPNSGYTQSQFSAPRDYSGYQRDGYQQNFKRGSGQSGPRGAPRGRGGPPRPNRGMPQMNTQQVN*