Sequence details bmy_18429 (Coding sequence)

Part of scaffold_1774 (Scaffold)

For more information consult the page for scaffold_1774 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LSMEM1 ENSTTRG00000011029 (Bottlenosed dolphin)

Gene Details

leucine-rich single-pass membrane protein 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010441, Bottlenosed dolphin)

Protein Percentage 96.06%
cDNA percentage 97.64%
Ka/Ks Ratio 0.72022 (Ka = 0.0216, Ks = 0.03)

BT.35621 ENSBTAG00000010555 (Cow)

Gene Details

coiled-coil domain-containing transmembrane protein C7orf53 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013956, Cow)

Protein Percentage 88.98%
cDNA percentage 91.6%
Ka/Ks Ratio 0.34021 (Ka = 0.0595, Ks = 0.1748)

Additional orthologs identified in other species via the OPTIC pipeline.

LSMEM1 (Human)   Lsmem1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 384 bp    Location:400566..407337   Strand:+
Raw sequence 
>bmy_18429
ATGAATCCTTCCCAGGACACCGGCTCTGGCGGCATTCCTGAAGATAGAAAGCTTTATGTTGTGGATTCCATAAATGACTTAAACAAACTAAACCTCTGTCCTGCCGGATCGCAGCGTTTGTTCCCTCTAGAGGAGAAAATCCCGGACATCGGCACTAACTCAGGAAATGGAAACCACAGTCTGTTTTTGGTGGGGCTGATCATCATGCTGATTGTCAGCCTGGCACTGGTTTCCTTCGTGATATTTCTGATAGTTCAAACTGGCAACAAGATGGAAGATGTGTCAAGAAGACTAGCAGCTGAGGGAAAGGACATAGATGATCTTAAGAAAATCAACAGCATCATTGTAAAGCGACTCAACCAACTGGACTCTGAACAGAGCTAA

Related Sequences

bmy_18429T0 Protein

Length: 128 aa      View alignments
>bmy_18429T0
MNPSQDTGSGGIPEDRKLYVVDSINDLNKLNLCPAGSQRLFPLEEKIPDIGTNSGNGNHSLFLVGLIIMLIVSLALVSFVIFLIVQTGNKMEDVSRRLAAEGKDIDDLKKINSIIVKRLNQLDSEQS*