Part of scaffold_1766 (Scaffold)

For more information consult the page for scaffold_1766 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

IFT52 ENSTTRG00000004514 (Bottlenosed dolphin)

Gene Details

intraflagellar transport 52 homolog (Chlamydomonas)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004248, Bottlenosed dolphin)

Protein Percentage 98.79%
cDNA percentage 98.92%
Ka/Ks Ratio 0.21069 (Ka = 0.0056, Ks = 0.0264)

IFT52 ENSBTAG00000019606 (Cow)

Gene Details

intraflagellar transport protein 52 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026122, Cow)

Protein Percentage 88.26%
cDNA percentage 88.26%
Ka/Ks Ratio 0.29495 (Ka = 0.0856, Ks = 0.2903)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 744 bp    Location:283406..300372   Strand:+
>bmy_18455
ATGAAACCAGCAGTGGCTGTTCTGTCCACAGGCTCTGTCTGTTTCCCACTTAACAGACCCATCCTGGCTTTCTATCACTCGAAGAACCAAGGTGGGAAACTGGCAGTGCTTGGCTCATGTCACATGTTCAGTGACCAATATTTGGATAAAGAAGAAAACAGCAAAATCATGGATGTTGTTTTCCAGTGGCTCACAACAGGAGACATCCACCTAAACCAGATTGATGCTGAGGACCCAGAGATTTCCGACTACATGATGCTGCCCGACACGGCCACCCTGTCCGAGCGGCTGCGAGTGTGTCTCCAGGAGGGCGATGAGAACCCTCGGGACTTCACCACCCTCTTCGACCTGTCCGTTTACCAGCTGGATACCACTTCCCTCCCCAAGGTCATCAAGGCTCACGAGCAGCTAAACGTGAAACATGAACCGCTCCAGCTCATCCAACCTCAGTTTGAGACGCCGCTGCCAGCCCTTCAGCCAGCGGTTTTCCCTCCTAGTTTCAGGGAATTATCACCCCCTCCGCTGGAGCTGTTTGACTTAGATGAGACGTTCTCCTCTGAGAAGGCCCGGCTTGCTCAGATCACCAATAAGTGTACTGAAGAAGACCTGGAATTCTACATCAGGAAGTGTGGTGACATCCTTGGAGTCACCAATAAACTACCAAAGGACCAGCAAGATGCCAAACATATCCTCGAGCACATCTTCTTCCAAGTGGTGGAATTCAAGAAATTGAACCAGGTATAG

Related Sequences

bmy_18455T0 Protein

Length: 248 aa      View alignments
>bmy_18455T0
MKPAVAVLSTGSVCFPLNRPILAFYHSKNQGGKLAVLGSCHMFSDQYLDKEENSKIMDVVFQWLTTGDIHLNQIDAEDPEISDYMMLPDTATLSERLRVCLQEGDENPRDFTTLFDLSVYQLDTTSLPKVIKAHEQLNVKHEPLQLIQPQFETPLPALQPAVFPPSFRELSPPPLELFDLDETFSSEKARLAQITNKCTEEDLEFYIRKCGDILGVTNKLPKDQQDAKHILEHIFFQVVEFKKLNQV*