Part of scaffold_1761 (Scaffold)

For more information consult the page for scaffold_1761 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FAP ENSTTRG00000013776 (Bottlenosed dolphin)

Gene Details

fibroblast activation protein, alpha

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013070, Bottlenosed dolphin)

Protein Percentage 46.91%
cDNA percentage 53.94%
Ka/Ks Ratio 0.1304 (Ka = 0.4084, Ks = 3.1319)

FAP ENSBTAG00000008140 (Cow)

Gene Details

seprase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010702, Cow)

Protein Percentage 52.48%
cDNA percentage 59.82%
Ka/Ks Ratio 0.14565 (Ka = 0.4028, Ks = 2.7654)

FAP  (Minke Whale)

Gene Details

fibroblast activation protein, alpha

External Links

Gene match (Identifier: BACU010079, Minke Whale)

Protein Percentage 53.15%
cDNA percentage 60.49%
Ka/Ks Ratio 0.15055 (Ka = 0.3951, Ks = 2.6245)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2265 bp    Location:382538..324626   Strand:-
>bmy_18464
ATGATGGGTTTAGAAAGGCTGAGGCCTGATGAGAGGATGAGCCCAGTGACATCGGAGGCGAAGCGGCAGGAGAGCACAATGCTTTACTTCTTATTTAAAGCAGATGATGCTACAGCTGATAGTCGGAGAACCTACACTCTAACCGATTATTTAAAAAATACTTTTAGAGTGAAGTTCTACACCTTGCGATGGGTTTCAGATCATGAATATCTCTACAAACAAGAAAATAATATCTTGCTATTCAATGCTGAATATGGAAACAGCTCCGTGTTCTTGGAGAACATATCTCCCGATAGACAATATATTCTCTTCGAATACAACTATGTGAAGCAATGGAGGCATTCCTACACAGCTTCATATGACATTTATGACTTAAATAAAAGGCAGCTAATTACAGAAGAGAGAATCCCAAACAACACACAGTGGATCACATGGTCACCAGTGGGTCATAAATTGGCGTACGTTTGGAAAAATGACATTTATGTCAAAAATGAACCAAATTTGCCAAGTCAGAGGATCACATGGACCGGGAAAGAAGATGTAATCTATAATGGAATAACTGACTGGGTTTATGAAGAGGAAGTCTTCAGTACTTACTCCGCTCTGTGGTGGTCTCCAAACGGCACTTTTTTAGCATATGCCCAATTTAACGACACAGAAGTCCCACTGATTGAATACTCCTTCTACTCTGATGAGTCACTGCAGTACCCAAAGACCATGCAGATTCCTTATCCAAAGGCAGGAGCTGTGAACCCAACTGTAAAGTTCTTTGTTGTAAATACCACCACYCTCAGCCCAGACATCAATGCAATTTCCCAACAAATCGTTCCTCCTGCTTCTGTGTTAATAGGGGATTACTACTTGTGTGATGTGACATGGGTAACCGAAGAAAGGATTTCTTTGCAGTGGATCCGGAGGATTCAGAACTATTCAGTCATGGATATCTGTGACTACGATGAGTCCACCGGAAGATGGATTTCCTCAGTGGGACGGCAACACATTGAAAAKAGTACCACTGGCTGGGTTGGAAGATTTAGGCCTGCAGAACCTCATTTTACCTCTGACGGGAATAGCTTCTACAAGATCATCAGCAACGAAGAGGGCTACAAACACATTTGTCACTTCCAAACAGATAAGAGAAATTGCACATTTATTACAAAAGGAGCCTGGGAGGTCATTGGGATAGAAGCKCTTACCAGTGATTACCTATACTACATTAGTAATGAACATAAAGGAATGCCAGGTGGAAGAAATCTTTATAAAATCCAACTTAATTACCACACAAAAGTGACGTGCCTTAGTTGTGAGCTGAATCCAGAAAGGTGTCAGTACTACTCTGTATCATTTAGTAAAGAGGCGAAGTACTATCAGCTGAGATGTTCTGGCCCTGGTCTGCCCCTCTATACTCTGCATAGCAACAGCAATGATAAAGAACTGAGAGTCCTGGAAGACAATTCAGCTTTGGATAAAATGCTGCAGGATGTCCAGATGCCCTCAAAAAAACTGGACTTCATTTATTTGCATGAAACAAAATTCTGGTATCAGATGATCTTGCCTCCTCATTTTGATAAATCCAAGAAATATCCTCTGCTAATAGATGTATATGCAGGCCCCTGTAGTCAAAAAGCAGATGCTGTCTTCAGACTCAACTGGGCTACTTACCTTGCAAGCACAGAAAACATTATAGTAGCTAGCTTTGATGGCAGAGGAAGTGGTTACCAAGGAGATAAGATCATGCACGCAGTCAACAGAAGACTGGGAACATTTGAAGTTGAAGATCAAATTGAAGCAACCAGACAATTTTCAAAAATGGGATTTGTGGATGACAAACGGATTGCAATTTGGGGCTGGTCATATGGAGGGTATGTAACCTCAATGGTCCTGGGAGCAGGAAGTGGTGTGTTCAAGTGTGGAATAGCCGTGGCACCCGTGTCAAAGTGGGAATACTATGATTCAGTGTACACAGAACGTTACATGGGTCTTCCAACTCCAGAAGACAACCTTGACCATTACAGGAATTCAACAGTCATGAGCAGAGCTGAAAATTTTAAACAAGTTGAGTACCTCCTTATTCATGGAACAGCAGATGATAACGTTCACTTCCAGCAGTCAGCTCAGATCTCCAAAGCCCTGGTGGATGCTGGAGTGGATTTCCAGTCAATGTGGTATACAGATGAAGACCATGGGATCGCCAGCAGCACAGCACACCAACACATATACACCCACATGAGCCACTTTCTAAAGCAATGCTTCTCTCTACCTTAG

Related Sequences

bmy_18464T0 Protein

Length: 755 aa      View alignments
>bmy_18464T0
MMGLERLRPDERMSPVTSEAKRQESTMLYFLFKADDATADSRRTYTLTDYLKNTFRVKFYTLRWVSDHEYLYKQENNILLFNAEYGNSSVFLENISPDRQYILFEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWITWSPVGHKLAYVWKNDIYVKNEPNLPSQRITWTGKEDVIYNGITDWVYEEEVFSTYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTMQIPYPKAGAVNPTVKFFVVNTTTLSPDINAISQQIVPPASVLIGDYYLCDVTWVTEERISLQWIRRIQNYSVMDICDYDESTGRWISSVGRQHIEXSTTGWVGRFRPAEPHFTSDGNSFYKIISNEEGYKHICHFQTDKRNCTFITKGAWEVIGIEALTSDYLYYISNEHKGMPGGRNLYKIQLNYHTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSNSNDKELRVLEDNSALDKMLQDVQMPSKKLDFIYLHETKFWYQMILPPHFDKSKKYPLLIDVYAGPCSQKADAVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAVNRRLGTFEVEDQIEATRQFSKMGFVDDKRIAIWGWSYGGYVTSMVLGAGSGVFKCGIAVAPVSKWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDAGVDFQSMWYTDEDHGIASSTAHQHIYTHMSHFLKQCFSLP*