Sequence details bmy_18467 (Coding sequence)

Part of scaffold_1772 (Scaffold)

For more information consult the page for scaffold_1772 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MCOLN2 ENSTTRG00000001963 (Bottlenosed dolphin)

Gene Details

mucolipin 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001842, Bottlenosed dolphin)

Protein Percentage 84.31%
cDNA percentage 87.12%
Ka/Ks Ratio 0.59487 (Ka = 0.1257, Ks = 0.2114)

MCOLN2 ENSBTAG00000046773 (Cow)

Gene Details

mucolipin-2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000056190, Cow)

Protein Percentage 80.8%
cDNA percentage 82.9%
Ka/Ks Ratio 0.33571 (Ka = 0.1424, Ks = 0.4242)

MCOLN2  (Minke Whale)

Gene Details

mucolipin 2

External Links

Gene match (Identifier: BACU004606, Minke Whale)

Protein Percentage 86.4%
cDNA percentage 88.98%
Ka/Ks Ratio 0.58243 (Ka = 0.1052, Ks = 0.1806)

Additional orthologs identified in other species via the OPTIC pipeline.

MCOLN2 (Human)   Mcoln2 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1284 bp    Location:97625..123607   Strand:+
Raw sequence 
>bmy_18467
ATGGCTCATCTTGATTCTGAGGTGAAAGAAGAATGTTTGAGAGAAGACCTGAAGTTTTACTTCATGAACCCTTGTGAAAAATTCCGAGCCAGACAACAGATTCCGTGGAAAATGGGTTTGCAGATTTTGAAGATAGTCATGGTCACCACACAGCTTGTTCGTTTTGGTTTAAGTAACCAGCTGGTGGTTGCTTTCAAAGAAGAAAACACTGTTGCTTTTAAGCACTTGTTTTTGAAAGGATATTCCGGTGTAGATGAAGATGAATACAGTTGCAGTGTATATACTCAAGAGGACACCTATGAGAGCATCTATTTTGCTATTAGTCAGGCAAGTATTTTGTTGAATTTATCTCTGGGGACCCTTGGTTATGGAGAAAATGAAGACAACAGAATTGGATTAAAAGTCTGTAAGCAGCATTACAAGAAAGGGACCATGTTTCCTTCTAATGAGACGCTAAATATTGACAGCGACATTGAAATAGCCTCTTGCAAGTTGAAATCTCCTTTCATCTCAAAGGCATTGACCTGCAGACGATTCATTCCCGAGAGCTACCAGACTGTTACATCTTTCAGAATACGGCAAATTATCTTTGACAATAAAGCTCACAGTGGCAAAATCAAAATCTACTTTGACAGTGACGCTAACATCGAGGAATGTAAGGACTTGAACATCTCCGGATCTATTCAGAAAAATACTCAGTATGTCCTGGTGTTTGATGCATTTGTCATTGTGATTTGCTTGGCATCTCTTATTCTGTGCACAAGATCCATTGTTCTTGGTCTAAGGTTACGAAAGAGATTCTTAGATTTCTTCCTGGAGAAGTACAAGCGATGTGTGTGTGACGCCGACCAGTGGGAGTTCATCAACAGATGGTATATCCTGGTGATTATCAGCGACCTAATGACAATAATTGGATCCATATTAAAAATGGAAATTAAAGCCAAGAATCTCACAAATTACGATYTGTGCAGCATTTTGCTTGGAACATCTACGCTCTTTGTCTGGGTTGGCGTCATCAGATACTTGGGTTACTTCCAAGCATATAATGTGCTCATTTTAACAATGCAAGCCTCACTGCCAAAAGTTCTTCGCTTCTGCGCGTGTGCCGGCATGATCTATCTGGGTTACACCTTCTGCGGCTGGATTGTCTTAGGACCATATCATGACAAGGTGTGTAGCCTAATTCTTCCTTCTGCACATGAAGCACTTGAGACCCTTAAATGTGGGTTTCCAGCACTGACCTTCATCCCACTTTTCTCCAGCACATACCCTGGACATCAGTAA

Related Sequences

bmy_18467T0 Protein

Length: 428 aa      View alignments
>bmy_18467T0
MAHLDSEVKEECLREDLKFYFMNPCEKFRARQQIPWKMGLQILKIVMVTTQLVRFGLSNQLVVAFKEENTVAFKHLFLKGYSGVDEDEYSCSVYTQEDTYESIYFAISQASILLNLSLGTLGYGENEDNRIGLKVCKQHYKKGTMFPSNETLNIDSDIEIASCKLKSPFISKALTCRRFIPESYQTVTSFRIRQIIFDNKAHSGKIKIYFDSDANIEECKDLNISGSIQKNTQYVLVFDAFVIVICLASLILCTRSIVLGLRLRKRFLDFFLEKYKRCVCDADQWEFINRWYILVIISDLMTIIGSILKMEIKAKNLTNYDLCSILLGTSTLFVWVGVIRYLGYFQAYNVLILTMQASLPKVLRFCACAGMIYLGYTFCGWIVLGPYHDKVCSLILPSAHEALETLKCGFPALTFIPLFSSTYPGHQ*