Part of scaffold_1770 (Scaffold)

For more information consult the page for scaffold_1770 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AFF2 ENSTTRG00000013641 (Bottlenosed dolphin)

Gene Details

AF4/FMR2 family, member 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012951, Bottlenosed dolphin)

Protein Percentage 76.67%
cDNA percentage 79.16%
Ka/Ks Ratio 0.55196 (Ka = 0.1232, Ks = 0.2232)

AFF2 ENSBTAG00000020750 (Cow)

Gene Details

AF4/FMR2 family member 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053415, Cow)

Protein Percentage 81.26%
cDNA percentage 83.0%
Ka/Ks Ratio 0.35047 (Ka = 0.1404, Ks = 0.4007)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3015 bp    Location:14499..160949   Strand:+
>bmy_18474
AGTGGAGCGACCCGACCAGCAGAGCTTCTACAAAGTGAGTACCGTTCAAGTCGTACGGGTCTGAAAACATCACAGCCATGGACCCAGAGAGTTGACAAAAGGCCTGACAAAGACAGTCTAGTTGTGGCCAGTTTACCTGTGGGTGACAGGATGCTTGAAGACGACCTGAAGCTGAGCAGTGATGAAGATGACCTTGAGCCCGTGAAGACCTTGACCACTCAGTGCACTGCCACCGAGCTCTACCAGGCTGTTGAAAAGGCAAAATCTAAGAATAATCCTGTAAAGTGGTCAGTTAACACTAAGAACCGTGACGATAAAATGGAAACAGAAAGCACCCAGTTATTGGTGCAGCAGAGCAGCCTCAAGCGAGCCAGCAAAGGTACTGTGCCTTTACGTAAAGACAGCCTCGCCACATCAAAGCCCGACAAGTCTATTTATTTGGTCTCTTCTGAGATGAAAAGGTGGTGTCATTTTCCTTTCAGCCTGCTCTTGGCCACGCCTCAGCCCACACCTGCAGCACCAGCCAGCGGGGGATCCGGCAGCTCCAGTGACTCTGAGAGCAGCTCAGAGTCAGACTCAGACACTGAAAGCAGCACCACTGACAGTGAAGCCAACGAGGCGCCGCGCGTGGCCACGCCAGAGCCTGAGCCGCCCTCCACCAACAAGTGGCAGCTGGACAAATGGCTTAACAAAGTGACATCTCAGAACAAGTCGTTTATTTGCGGCCAAAATGAAACACCCATGGAGACGATTTCTGTACCTCCTCCAATCATACAGCCAATGGAAGTCCAGGTCAAGGTGAAGGCAAACCCCAGCCAGGTCCTGGCTGAACCCAAAGAGAGGCCTCTCCTCAGTCTCATCAGGGAGAAAGCCCGTCCACGGCCCACCCCGAAAATTCCAGAAACAAAGGCTCTGAAGCATAAATTGTCGACAACTCTCGAGACAGCACCTCAAAGGACAATTGGGAAAAAACAGCCCAAGAGGGTCGAGAAGAACCCCAGCATTGAGGAATTTACCTGGCCCAAACCAAATATCACCAGCAGCACTCCCAAAGAAAAGGAAAGCATGGAGCTTCCTGACCCCCCGAGAGGCCGCAACAAGGCCACCGCCCACAAGCCGGTCCCTAGGAAAGAACCGAGGCCCAGCATCCCCTTGGCTGCCGAGAAGAAGAAGTACCGAGGGCCTGGCAAGATCGTGCCGAAGTCCCGGGAATTCATTGAAACCGATTCGTCTACGTCTGATTCCAACACAGATCAGGAAGAGACCCTGCAGATCAAAGTCCTGCCTCCTTGCATGGCTCCTGGGGGCAACACTGCCAAGTCCAAGGACACCTGCGGGGCCAGCCTGACCCTCAGCACCTTGAGCAGCAGCAGCGGCAGCAACCCGCCCGTCCCGACTGAGGAGCCTGCTTTTTCGCCCATCCCCGTCACGCAAACCGAGCTTCTGTCTCCTCTCCGAGATCACGAGAATCTGAAAAATCTCTGGGTGAAGATTGACCTCGACCTACTGTCTCGAGTGCCTGGCCACAACTCGCTGCAAGCGGCGCCGGCCAAGCCAGACCACAAGGAGACAGCGTCAAAGCCCAGGCGGCAGGCAGCTGCCGCGGCTGCGGACAAACCCGCCCCCAAGGGCAAGCGTAAGCACAAGCCAACAGAAGTTGCGGAGAAAATCCCTGAGAAGAAGCAACGCCTGGAGGAGGCGGCCACCATCTGCCTGCTACCACCTTGCATCTCACCAGCTCCCCCCCAGAAGCCTCCCAGCACTAAAGAAAATAATTCATCCAGGAGAGCAAACAGAAGAAAAGAAGAAAAGCTGTTTCCCCCTCCACTTTCCCCGCTGCCAGAGGATCCTCCACGCCGCAGGAACATCAGCGGCAATAATGGTCCCTTCAGTCAAGACAAGACCATCCCTATGATTGGACAGATCACCTCGACCAAACCTAAGAGGAGYGAAGGCAAATTCTGTGCTACTTTCAAAGGGATATCTGTAAATGAGGGAGACACTCCAAAAAAGGCAGCCTCTGCCACCGTCACTGTCACCAACACTGCTCTTGCCACTGCCACTGTCACTGCTACTGCCATTGTCACCGCCACTGTCACGGCCACTGCCACGGCCACTGCCACTACCACTACCACTACCACTACCATTTCCACCATCACCTCCACCATCACTACTGGCCTCATGGACAGCAGTCACCTGGAGATGACATCCTGGGCGGCCCTGCCCGTTCTGTCCAGCAGCACTACCAATGTCCGGAGACCCAAGCTCACTTTTGATGACTCGGTTCACAACGCTGATTATTACATGCAAGAGGCGAAGAAGCTGAAGCACAAAGCTGATGCACTGTTTGAGAAATTTGGCAAAGCCGTGAATTATGCCGATGCAGCCCTGTCCTTCACCGAATGTGGCAACGCGATGGAGCGCGACCCTCTGGAAGCCAAGTCTCCGTACACCATGTACTCTGAGACTGTGGAGCTTCTCAGGTATGCAATGAGGCTGAAGAACTTTGCAAGCCCCCTGGCTTCGGATGGGGACAAAAAGCTGGCCGTACTATGCTACCGATGCTTATCACTTCTCTACCTGCGGATGTTCAAACTGAAGAAGGACCACGCCATGAAGTACTCCAGATCACTGATGGAATATTTTAAGCAAAATGCTTCAAAAGTCGCTCAGATACCATCTCCATGGGTAGGCAATGGAAAAAACACTCCGTCCCCAGTGTCTCTCAACAACGTGTCTCCCATCAACGCAATGGGGAACTGTAACAACGGCCCGGTCACCATCCCCCAGCGCATTCACCACATGGCCGCCAGCCACGTCAACATCACTAGCAACGTGTTACGGGGCTACGAACACTGGGACATGGCCGACAAACTGACAAGAGAGAACAAAGAATTCTTTGGCGATCTGGACACRTTGATGGGGCCCCTGACCCAGCACAGCAGCATGACCAATCTCGTCCGCTACGTTCGCCAGGGACTGTGCTGGCTGCGCATCGACGCCCATTTGTTGTAG

Related Sequences

bmy_18474T0 Protein

Length: 1005 aa      View alignments
>bmy_18474T0
SGATRPAELLQSEYRSSRTGLKTSQPWTQRVDKRPDKDSLVVASLPVGDRMLEDDLKLSSDEDDLEPVKTLTTQCTATELYQAVEKAKSKNNPVKWSVNTKNRDDKMETESTQLLVQQSSLKRASKGTVPLRKDSLATSKPDKSIYLVSSEMKRWCHFPFSLLLATPQPTPAAPASGGSGSSSDSESSSESDSDTESSTTDSEANEAPRVATPEPEPPSTNKWQLDKWLNKVTSQNKSFICGQNETPMETISVPPPIIQPMEVQVKVKANPSQVLAEPKERPLLSLIREKARPRPTPKIPETKALKHKLSTTLETAPQRTIGKKQPKRVEKNPSIEEFTWPKPNITSSTPKEKESMELPDPPRGRNKATAHKPVPRKEPRPSIPLAAEKKKYRGPGKIVPKSREFIETDSSTSDSNTDQEETLQIKVLPPCMAPGGNTAKSKDTCGASLTLSTLSSSSGSNPPVPTEEPAFSPIPVTQTELLSPLRDHENLKNLWVKIDLDLLSRVPGHNSLQAAPAKPDHKETASKPRRQAAAAAADKPAPKGKRKHKPTEVAEKIPEKKQRLEEAATICLLPPCISPAPPQKPPSTKENNSSRRANRRKEEKLFPPPLSPLPEDPPRRRNISGNNGPFSQDKTIPMIGQITSTKPKRSEGKFCATFKGISVNEGDTPKKAASATVTVTNTALATATVTATAIVTATVTATATATATTTTTTTTISTITSTITTGLMDSSHLEMTSWAALPVLSSSTTNVRRPKLTFDDSVHNADYYMQEAKKLKHKADALFEKFGKAVNYADAALSFTECGNAMERDPLEAKSPYTMYSETVELLRYAMRLKNFASPLASDGDKKLAVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKQNASKVAQIPSPWVGNGKNTPSPVSLNNVSPINAMGNCNNGPVTIPQRIHHMAASHVNITSNVLRGYEHWDMADKLTRENKEFFGDLDTLMGPLTQHSSMTNLVRYVRQGLCWLRIDAHLL*