Part of scaffold_1793 (Scaffold)

For more information consult the page for scaffold_1793 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AHCTF1 ENSTTRG00000002937 (Bottlenosed dolphin)

Gene Details

AT hook containing transcription factor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002778, Bottlenosed dolphin)

Protein Percentage 92.83%
cDNA percentage 94.56%
Ka/Ks Ratio 0.91005 (Ka = 0.0168, Ks = 0.0185)

AHCTF1 ENSBTAG00000013949 (Cow)

Gene Details

protein ELYS

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018538, Cow)

Protein Percentage 89.79%
cDNA percentage 93.3%
Ka/Ks Ratio 0.3792 (Ka = 0.0516, Ks = 0.1361)

AHCTF1  (Minke Whale)

Gene Details

AT hook containing transcription factor 1

External Links

Gene match (Identifier: BACU001648, Minke Whale)

Protein Percentage 96.32%
cDNA percentage 97.23%
Ka/Ks Ratio 0.54617 (Ka = 0.024, Ks = 0.0439)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 6414 bp    Location:234937..304135   Strand:+
>bmy_18501
ATGCGAGACCTAACAGCACAAGTGACCGTAACAGCACAATTCCCAGAAGTGACTATCCAAGCCCTTGGAGAAGATGAAATAACATTAGAATCTGTGCTTCGTGGAAAGTTTGCTGCAGGGAAAAATGGACTTGCTTGCTTGGCTTGTGGTCCGCAACTTGAGGTAACAGCTATTGAACCTATAATTAATCATGGAGGAGCCAGTGCAAGTACTCAGCATTTACACCCAAGTCTGCGATGGCTTTTTGGTGTGGCAGCTGTGGTAACTGATGTTGGACAGATCCTTCTTATTGACCTGTGTTTGGATGAGTTGTCAGGCAATCAGAATGAAGTAGAGGCATCAGACCTTGAAGTTATAACTGGTATCCCAGCTGAAGTACCACACATCAGAGAAAATGTGATGCGAGAGGGACGCCATCTGTGTTTTCAATTAGTAAGCCCATCAGGAACAGCCGTTTCAACSCTTAGTTACATAAACCGGACAAATCAGCTTGCTGTTGGTTTTTCTGATGGGTATCTAGCACTTTGGAATATGAAAAGCATGAAAAGAGAATACTACACACAGTTGGAAGGTGGAAGAGTTCCTGTATATGCTGTCACTTTTCAAGAACCTGAGAATGATCCTCGTAATTGCTGTTACTTGTGGGCTGTTCAGTCTACACAAGATAGTGAAGGGGATGTTTTGAGTTTGCATCTGCTTCAGCTGGCCTTTGGTGACAGAAAGTGTTTGGCATCAGGACAAATTTTATATGAGGGGTTAGAGTACTGTGAAGAAAGATATACACTGGACCTCACAGGTGGCATGTTTCCTTTGAGGGGCCAGACTGGTAATACCAAACTTTTGGGATGTCAAACTGTAGAGAAATTTCGATCTCATGGTGACAGGGAGGAAGGCATGAATGAAGCTCTGTCTCCTGACACCAGTGTTTCAGTCTTTACCTGGCAGGTGAATATATATGGACAGGGAAAGCCTTCTATATATTTGGGGCTTTTCGACATAAATCGTTGGTATCATGCACAAATGCCAGATTCGTTAAGATCAGGAGAATATCTACATAATTGCTCTTATTTTGCATTGTGGTCACTGGATTCTGTTGTAAGTAGGACTTCTTCACATTACATCTTGGATATATTAGTACATGAGAGAAGTTTAAGTCGAGGAGTTCCTCCTTCATATCCACCTCCTGAGCAGTTTTTTAACCCAAGTACTTACAACTTTGATGCCACTTGTTTGTTAAACTCAGGAGTTGTTCATATAACTTGTAGTGGTTTTCAGAAGGAGACTTTGACTTTTTTAAAGAAATCAGGACCATCTCTCAATGAAGTCATTCCTGATAGTTACAATCGATGTCTTGTGGCTGGCCTTCTCTCACCAAGACTTATTGACATTCAACCTTCCAGTTTAAGTCAGGAAGAACAGTTAGAAGCTATATTGTCAGCAGCAATCCAGACAAGTTCTCTGGGACTTTTGACTGGATGTATCAAAAGGTGGATAACAGAAGGTGCGCCATTATTTGATGGTTCGTGTCGTTTCATCGATCCACAAACTGTACAGTCTCTCCAGCAGTGCCATTTACTTCTTAGCAACCTTAATATAGTCTTAAGCTGTTTTGCAGCTGAGGCCCAAGAGATCACCGAGAGAGATGATGCTGTGCAGTTGTCAAGGCTATGCTACAACTACCCTGTAATTCAGAACTACTACACCAGTCGTCGACAGAAGTGTGAGCGTTCATCAAGAGGGAARTGGAACCCTGATTGCTTGATGATTGATGGAATGGTTTCTCAGTTAGGAGATCGAGTAGAGAAGTTGTGGAAACGGGATGAAGGAGGCACAGGAAAATATCCTCCTACTAGTCTACATGCATTACTTGACATATACCTACTGGACAACGTTACCGAAGCAAGCAAGCATTCTGTTACTATTTATTTGCTACTTGATATTATGTATTCCTTTCCAAACAAAATGGATACTTCCATTGAATCATTTCCAACTGCCTTTGCCATTTCTTGGGGCCAGGTTAAACTTATTCAAGGGTTTTGGCTGATAGATCATAATGACTATGAGAGTGGTTTGGATCTTCTGTTTCACCCAGCTACTGTAAAACCTGTGTCATGGCAACATTCAAAGATTATTGAAGCCTTCATGAGTCAGGGTGAGCACAGACAAGCCCTCAGATATATTCAAACAATGAAGCCAACAGTGTCCAGTGGTAGCGATGTTATCCTTCACCTCACCGTTTTGCTCTTTAATAGGTGCATGGTTGAAGCCTGGAGTTTACTGCGACAGCATTCTAATAGGTTGGATATAGAGGAGTTGCTCAAGCACACATATGAAGTCTGTCAGGAAGTGGGCTTAATGGAGGATTTACTGAAGCTGCCATTCACAGACACTGAACAGGAGTGTTTGGTGAGATTTTTACAGTCCAGTGCCAGTGTTCAGAATCATGAATTCCTTTTAGTTCACCATTTGCAGCGTGCCAATTATATTCCTGCCTTGAAGCTGAACCAAACTCTGAAGATAAATCTTATGAATGATCGTGATCCTCGTTTGCGAGAGAGATCAATGGCTCGAAATTCTATATTAGACCAATATGGGAAAATTCTTCCTAGAGTCCAGCGAAAATTAGCCACTGAGCGAGCTAAGCCTTACCATCTGTCAGCATCATCAGTTCTTCGAGAAGTTTCTAGGCCAAAACCATTATCAGCAGTTCCAAAGCAAGCTGTAACAGGGACTGTGTTAACAAGATCTACTTTCATCAGTAATGTGTTATCTAAAATTGGAGAGGTCTGGGCAAGTAATGAACCTAAAAATAGCATCTCTGTCTACAATAGTCCTAAAATAGAGGAACCATCTCCTATAGTATATTCCCTCCCAGATCCAGAGCTGCCTGAGGCATTTGTTGGAACACCAATTTCAAAAGCATCACAAAAAATTTCTAGGCTGCTGGATTTGGTTGTTCATCCTGTCCCCCAGCCTGCTCAGTGTTTGGGATTTATTCAGCAAAGCCCCACAAGATCTCCTTTGTCCCTGGCATCCACCTCATTGCCAGTAAATTCACAATCAAACGGATCACGTCACAATGCTTCCAGGGCTTCAGAATTACATTTACTTGAAACTCCTCTTGTAGTTAAGAAAGCTAAGACTTTGGCTATGTCAGTTACTTCCCCTGGATTTGCCGAGTTCACTCCTCAGTCCATCCTAAGGTCTGGTCTTCGAACAACACCTTTAGCGTCTCCCTCTTTGTCACCTGGAAGGTCTCTTACTCCTCCTTTACGACTTAAAGAAACTAGAATTTCATTCATGGAAGAAGGCATAACCACAAAATGGACTGCTGGAGCTGCAGATGACAGCAAAACAAAAGCATTTATTACTGCACCTTTCCATAAATGTGCAGTTCCAGCAGAAACTGAATGGCTGAAGAATAAAGATAAGGCAACATCTTTTCCCCTGAATAGCCCTGAAAAGGACCATCAAGAAATGAATGTGAGGTCACAGGATACAACTTCACAAAGTTTGGAGAAACTGGATGTGAGCGTAGAAAATAGCAATACTTCAACCAGATCAGACCAGACTACCTTGGAGTATCAGGATGCTCCATCACCAGAAGACTTTGAAGGTATTTTCATGGCCTCTAAGCCAGTGACACGCTCTTCCACTGAACAAATTACTAATTTAACTGAACAGACTGAGAACAGTGATAAAGATACATTTGAATCGGAAGTAACTCCTCCAGACCTGGAGAAACAAATGGGCACTTTAGAAGATGCAGAAACAAAGGATCTCTTAGTTGCACAGGGGGCACTTTCAGAATTAAATACCTTAAGCCCCATTCAAGGAGTTGAAGCTTCTTTTTGTGTACCATCAGTCTGTGAAGGGAAAATCCTCACCCCGAAGTCCAAGGTACCTGTTTTAGACGAAGGACTAGTATCTGTTGAAACCTGTACCTCTACAATTAGAGCAGCTATGGCTGATGTTCTTGGTGATAGTGGAAGCTCTGGGCTTGTTATCTCTGAAGGCCCTATTATCTCTGAACGTAGGCTTGACCAGGAAACAGCACTGAACTTAAAAGAAGATCATGAAATAGAAGTTGATGTACTAAAAGCAAGTGTTGACTTACCAGAAGAAAAGCCTCCAGTTTCTGATGATTCTCCTGATACCCAAGAAATTCATGTAATTGAACATGAAAAGCTTGAAGTTCAAGATTCAGGACAAGAGGCTAGGAGTCTTTCATTTAATGAGTTGTATCCCTCAGGAACTCTTAAGCTTCGATACAATTTTGATACCATTGAGCAACAGTTTTGTGACTTACCTGATAACAAAGACTCTGCTGAGTGTGACATTGCTGAAGTAGATGGGGAACTTTTTGTGCCACAGAGCAACTTTACCTTGATTTTGGAAGGTGAAGAAGGAGAAGTAGAGACAGGTGATTCTGCAGCATCTAATGTGCTAGCTAAAGCAGCTAATGCAGCCACTGAGGAAAAACATGTATACAGTGGGGAAAATGATAATCACGGACATGTTGCAAATTTGCCATCTGTCATAACTAGTGATCAGGAGTCCCAAAGGGTAGAGACATTACCATATGTGCCTGAACCAATTAAAGTAGCAATCGCAGAAGATTTATTAGATGTAATTAAAGACACAAGAAGTAAAGAAATTACTTCAGATACAATGGAACAGTCCATTCAAGAAAACATACCTTTAATAAGCCAAAAGGTAATGTGTTCCACCAAGTTAGCCAAATCTACATTTAAGACTGTTCAGGAAACAAGTACGGTGACTATAAATGTCAGCGAGGTTAATGACATGATTTCCTCCAGAACTCGCAACAGAGGACGTGTCCAAAACCTGAATGTCAAATCGGCACAACAGGAAGAGTCAGCAGATGTTGCTACTCCTGAGATGCTGGGACTTTCAGTTACGAAGAAAACTAGGAAAACAAAAGAAATTTCGGGGGCTTTTGAAAGTGCCTGTTCTGATGATAAAGGAATATCTCATAACCAGCAAATACCTCAAAATTCTGTTACTCCTAGGAGAGGAAGGAGAAAAAAAGAAATTAATCAAGACATTTTAGAAAATATTAATTCTGTGGAACAAGAATTACAGGTTACTCCAGGTAGGGAATTAAGAAGGTTAAAATCATCTCAGCTGTTGGAACCAGCAACTGAAGAAACTTCTTTTAGAAAAGAAGTTAAGCTTTCATCTGTTACAAAAAGGACTCCTAAACGAATTAAAAAATCTGTCGAAAATCAGGAAAGTGTTGAAGTTATAAATGATCTGAAAATCAGTAAAGTAGCAAGTCCTAGCAGAAGTACCAGGAAATTGAGAAGTGCTAATTTGGAAACTTCTAAAAATACAGGATATAAACAAGATGGGGAGTCCATTGAAGAGCAACTGCCTATTCAACATAGTAAAAGGGTTAAAAAGAAAGAAGTTAGTGCATCAGATGTAATAGAAGATTCCAAACTTGGTTCATCCCAGTTGACTCTTCAAGCAGAATTTGATACTCCTGCTACACCTAGGAAACGTGGTAGACCAAGAAAAATTAATCCATCTGAAGATGTAGAATCTAAGGCTGTTAAGGAAGCAAGAAGTCTCAAGAAGAGAGAAGGTCTCAGCATCCAAAGGAGATCTACAAGAAACACCCCAGCTAAAAGTGAAAATACTGATGTTGGAAAACCAGCTTTAGAAAAATCAGTTTTAGTGCCAAATGAGGAACTTGTTACAGCGATGAGCTCTAAGAAGAAGCTTACAAAAAGGACTGAAAACCAAAGCCAAAAACGTTTATTACGCTCAATATCAGAAAAATGCATAGATGAAGAAATGACAGACAAAGAACCGAATGACCAAGAAGAAAAATTGCTTGCCACAGTTGCTTTGACTAAATCTTCCCGTAGCACAAGGACTAGATCTAGCAAGGCCATCTTGTTGCCGGACCTTTCTGAACCAAAAAATGAGTCTTTTTTATTTTCTCCTCCTGTGTCAAAGGTTCCAAGGAAAGAGAAAGCTAAAAAAATAGAGGCTCCTGTGCAGCTGCAAGAATTAGTTTCGGATTTATCTTCTCAATTTGTCTTCTCACCTCCTACTTTAAGGACCAGGCGGAAAAACACATCTAATACATCCAAACTTGTAGATGAACTGGAAGATGATGCTCAATCAGTTGAAACTGTGGGAAAGCAACAAGTGAAAAGAACCAGGACTGCAAAAACAAAACAATCAAGCAAAAACACAGAAAAAGAAAGTTGGTCACCTCCTCCAGTAGAAATTAAGCTGATTTCCCCCTTGGCAAGCCCAATTGATGGAGTAAAGAGCAAACCAAGAAAGACTGTAGAAGTAACAGGAAAAAGTCTTGGAAGGAGCAGAAAGAAATTGTCTTCTTTTCCAAAGCAAGTTGTACGCAGAAAAATGCTGTAA

Related Sequences

bmy_18501T0 Protein

Length: 2138 aa      View alignments
>bmy_18501T0
MRDLTAQVTVTAQFPEVTIQALGEDEITLESVLRGKFAAGKNGLACLACGPQLEVTAIEPIINHGGASASTQHLHPSLRWLFGVAAVVTDVGQILLIDLCLDELSGNQNEVEASDLEVITGIPAEVPHIRENVMREGRHLCFQLVSPSGTAVSTLSYINRTNQLAVGFSDGYLALWNMKSMKREYYTQLEGGRVPVYAVTFQEPENDPRNCCYLWAVQSTQDSEGDVLSLHLLQLAFGDRKCLASGQILYEGLEYCEERYTLDLTGGMFPLRGQTGNTKLLGCQTVEKFRSHGDREEGMNEALSPDTSVSVFTWQVNIYGQGKPSIYLGLFDINRWYHAQMPDSLRSGEYLHNCSYFALWSLDSVVSRTSSHYILDILVHERSLSRGVPPSYPPPEQFFNPSTYNFDATCLLNSGVVHITCSGFQKETLTFLKKSGPSLNEVIPDSYNRCLVAGLLSPRLIDIQPSSLSQEEQLEAILSAAIQTSSLGLLTGCIKRWITEGAPLFDGSCRFIDPQTVQSLQQCHLLLSNLNIVLSCFAAEAQEITERDDAVQLSRLCYNYPVIQNYYTSRRQKCERSSRGKWNPDCLMIDGMVSQLGDRVEKLWKRDEGGTGKYPPTSLHALLDIYLLDNVTEASKHSVTIYLLLDIMYSFPNKMDTSIESFPTAFAISWGQVKLIQGFWLIDHNDYESGLDLLFHPATVKPVSWQHSKIIEAFMSQGEHRQALRYIQTMKPTVSSGSDVILHLTVLLFNRCMVEAWSLLRQHSNRLDIEELLKHTYEVCQEVGLMEDLLKLPFTDTEQECLVRFLQSSASVQNHEFLLVHHLQRANYIPALKLNQTLKINLMNDRDPRLRERSMARNSILDQYGKILPRVQRKLATERAKPYHLSASSVLREVSRPKPLSAVPKQAVTGTVLTRSTFISNVLSKIGEVWASNEPKNSISVYNSPKIEEPSPIVYSLPDPELPEAFVGTPISKASQKISRLLDLVVHPVPQPAQCLGFIQQSPTRSPLSLASTSLPVNSQSNGSRHNASRASELHLLETPLVVKKAKTLAMSVTSPGFAEFTPQSILRSGLRTTPLASPSLSPGRSLTPPLRLKETRISFMEEGITTKWTAGAADDSKTKAFITAPFHKCAVPAETEWLKNKDKATSFPLNSPEKDHQEMNVRSQDTTSQSLEKLDVSVENSNTSTRSDQTTLEYQDAPSPEDFEGIFMASKPVTRSSTEQITNLTEQTENSDKDTFESEVTPPDLEKQMGTLEDAETKDLLVAQGALSELNTLSPIQGVEASFCVPSVCEGKILTPKSKVPVLDEGLVSVETCTSTIRAAMADVLGDSGSSGLVISEGPIISERRLDQETALNLKEDHEIEVDVLKASVDLPEEKPPVSDDSPDTQEIHVIEHEKLEVQDSGQEARSLSFNELYPSGTLKLRYNFDTIEQQFCDLPDNKDSAECDIAEVDGELFVPQSNFTLILEGEEGEVETGDSAASNVLAKAANAATEEKHVYSGENDNHGHVANLPSVITSDQESQRVETLPYVPEPIKVAIAEDLLDVIKDTRSKEITSDTMEQSIQENIPLISQKVMCSTKLAKSTFKTVQETSTVTINVSEVNDMISSRTRNRGRVQNLNVKSAQQEESADVATPEMLGLSVTKKTRKTKEISGAFESACSDDKGISHNQQIPQNSVTPRRGRRKKEINQDILENINSVEQELQVTPGRELRRLKSSQLLEPATEETSFRKEVKLSSVTKRTPKRIKKSVENQESVEVINDLKISKVASPSRSTRKLRSANLETSKNTGYKQDGESIEEQLPIQHSKRVKKKEVSASDVIEDSKLGSSQLTLQAEFDTPATPRKRGRPRKINPSEDVESKAVKEARSLKKREGLSIQRRSTRNTPAKSENTDVGKPALEKSVLVPNEELVTAMSSKKKLTKRTENQSQKRLLRSISEKCIDEEMTDKEPNDQEEKLLATVALTKSSRSTRTRSSKAILLPDLSEPKNESFLFSPPVSKVPRKEKAKKIEAPVQLQELVSDLSSQFVFSPPTLRTRRKNTSNTSKLVDELEDDAQSVETVGKQQVKRTRTAKTKQSSKNTEKESWSPPPVEIKLISPLASPIDGVKSKPRKTVEVTGKSLGRSRKKLSSFPKQVVRRKML*