Sequence detailsbmy_18503 (Coding sequence)

Part of scaffold_1793 (SequenceType object (1))

For more information consult the page for scaffold_1793 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCCPDHENSTTRG00000014184 (Bottlenosed dolphin)

Gene Details

saccharopine dehydrogenase (putative)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013451, Bottlenosed dolphin)

Protein Percentage 81.46%
cDNA percentage 83.98%
Ka/Ks Ratio 0.58076 (Ka = 0.0916, Ks = 0.1578)

BT.27130ENSBTAG00000003804 (Cow)

Gene Details

probable saccharopine dehydrogenase

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000004949, Cow)

Protein Percentage 83.13%
cDNA percentage 87.23%
Ka/Ks Ratio 0.46159 (Ka = 0.1135, Ks = 0.2459)

SCCPDH (Minke Whale)

Gene Details

saccharopine dehydrogenase (putative)

External Links

Gene match (Identifier: BACU001647, Minke Whale)

Protein Percentage 89.64%
cDNA percentage 91.97%
Ka/Ks Ratio 0.64309 (Ka = 0.0773, Ks = 0.1203)

Additional orthologs identified in other species via the OPTIC pipeline.

SCCPDH (Human)   Sccpdh (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1287 bp    Location:427778..381096   Strand:-
Raw sequence 
>bmy_18503
ATGCAACGCCTGGGGCAGTCAGAGCTATGCAGGACCAACAACGAGGCGGAGGATGGGCCGCCGCCTGCTGCCGCCAGCCCCGCAAGCACACAGGCCTCGCGAGCCAGGGCCGCCAGCAGCAGCGCGGGGTACACCGCAGAGGAGGAGAAGGAGCCGACACTGTCATCTGAAGTTGGAATAATAATTTGTGATATCACTAATCCAGCCTCACTTGATGAAATGGCTAAACAGGCAACAGTTGTCCTCAACTGTGTAGGACCAAAAGGGGAGGAGGATGTGGAGATGAGGCTGTGGAGTCAGTACCGATTTTATGGAGAACCTGTAGTAAAAGCATGTGTTGAAAATGGAACTAGCTGTATTGACATCTGTGGAGAACCTCAGTTTCTGGAACTAATGTATTGGAAGTATCATGAGAAAGCTGCAGAAAAAGGGGCTTATATCGTTGGAAGCAGTGGCTTTGACTCCATTCCAGCAGATCTGGGAGTAATATATACCAGAAATAAAATGAATGGTACATTGACTGCTGTGGAAAGTTTCCTGACTATACATTCAGGACCTGAGGGGTTGTGCATTCATGATGGTACCTGGAAGTCAGCAGTTTATGGTTTTGGAGATCAGAGTAATTTGAAAAAACTACGAAATGAGTCCAATTTGAAGCCTGTCCCAATTGTTGGTCCAAAATTGAAAAGAAGGTGGCCAGTTTCTTACTGCAGAGAACTCAACAGTTATTCCATTCCTTTCTTGGGAGCAGATGTGTCTGTTGTGAAGCGGACTCAGCGTTACTTGCACGAAAATTTAGAGCAATCACCTGTTCAGTATGCTGCTTATGTAACTGTGGGAGGTGTCACCTCTGTTATTAAGCTGATGTTTGCTGGACTTTTCTTTTTATTCTTTGTGAAGTTTGGCATTGGAAGGCAACTCCTCATAAAATTTCCATGGCTCTTCTCCTTTGGTTATTTTTCAAAACAAGGTCCAACACAAAAACAGATTGATGCCTCATCATTTACGTTGACATTTTTTGGTCAAGGATACAGCCAAGGCTTTGGTCCTGATAAGAACAAACCAAATATCAGAATTTGTACTCAGGTGAAAGGACCAGAAGCTGGCTATGTGGCTACCCCCATAGCCATGGTCCAGGCAGCCATAACTCTACTAACTGACACCTCTGATCTTCCTAAGGCAGGTGGGGTCTTCACTCCTGGAGCAGCTTTCTCCAGAACAAAGTTGATTGACAGACTCAACCAACGTGGCATTGAATTTAGTGTCATTAGCAGCTCTGAAGTCTAA

Related Sequences

bmy_18503T0 SequenceType object (3)

Length: 429 aa      View alignments
>bmy_18503T0
MQRLGQSELCRTNNEAEDGPPPAAASPASTQASRARAASSSAGYTAEEEKEPTLSSEVGIIICDITNPASLDEMAKQATVVLNCVGPKGEEDVEMRLWSQYRFYGEPVVKACVENGTSCIDICGEPQFLELMYWKYHEKAAEKGAYIVGSSGFDSIPADLGVIYTRNKMNGTLTAVESFLTIHSGPEGLCIHDGTWKSAVYGFGDQSNLKKLRNESNLKPVPIVGPKLKRRWPVSYCRELNSYSIPFLGADVSVVKRTQRYLHENLEQSPVQYAAYVTVGGVTSVIKLMFAGLFFLFFVKFGIGRQLLIKFPWLFSFGYFSKQGPTQKQIDASSFTLTFFGQGYSQGFGPDKNKPNIRICTQVKGPEAGYVATPIAMVQAAITLLTDTSDLPKAGGVFTPGAAFSRTKLIDRLNQRGIEFSVISSSEV*