Part of scaffold_1778 (Scaffold)

For more information consult the page for scaffold_1778 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RARRES1 ENSBTAG00000014713 (Cow)

Gene Details

retinoic acid receptor responder protein 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000039864, Cow)

Protein Percentage 81.31%
cDNA percentage 88.22%
Ka/Ks Ratio 0.47215 (Ka = 0.1021, Ks = 0.2161)

RARRES1  (Minke Whale)

Gene Details

retinoic acid receptor responder (tazarotene induced) 1

External Links

Gene match (Identifier: BACU000454, Minke Whale)

Protein Percentage 99.22%
cDNA percentage 98.45%
Ka/Ks Ratio 0.08568 (Ka = 0.0038, Ks = 0.0444)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 597 bp    Location:429076..410261   Strand:-
>bmy_18515
ATTAATCAAAAGAAGGAATATAAAGTTGACCTGGCGTTTACCACGGAGCTCTACAACCCAGAGGAAGGTAAGGAACGTCTGGGGAAATGTTCTGCTCGAGTGTTTTTCAGGAACGAGAAATCCAGACCGGCCATTAATATAACATGTACTCGGCTCATTGAGAAGAAGACAAGACAAGAAGAAGATTATCGGCTCTATAAGTACATGAAGCAACTTCAAAACCTCTTGGATGTAGTCAGCATACCTGATAGTCATGGAGATATTGATCCCTCTCTGAGACCCATCTGGGATTTAGCTTTTCTGGGCAGCTCTTACGTGATGTGGGAAAAGACAACACAGTTTTTACACTACTACATGGCACAGCTCAGCAGTGTGAAGCAGTGGAAAACAAATGAAGATGCAATTGATTTTGATTATACTGTTCTACTCCATGAATTCTCAACACAGGAAATGATTCCCTGTCATATTCACTTGGTCTGGTACCCCGGCAAACCACTGAAGGTGAAGTACCACTGTCAAGAGCTACAGACACCAGAAGAAGCCTCTGGAACTGAAGAGGGATCAGCTGTGGCACCGACAGAGCTTAGTAATTTCTGA

Related Sequences

bmy_18515T0 Protein

Length: 199 aa      View alignments
>bmy_18515T0
INQKKEYKVDLAFTTELYNPEEGKERLGKCSARVFFRNEKSRPAINITCTRLIEKKTRQEEDYRLYKYMKQLQNLLDVVSIPDSHGDIDPSLRPIWDLAFLGSSYVMWEKTTQFLHYYMAQLSSVKQWKTNEDAIDFDYTVLLHEFSTQEMIPCHIHLVWYPGKPLKVKYHCQELQTPEEASGTEEGSAVAPTELSNF*