Part of scaffold_1837 (Scaffold)

For more information consult the page for scaffold_1837 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NFYA ENSTTRG00000013394 (Bottlenosed dolphin)

Gene Details

nuclear transcription factor Y, alpha

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012708, Bottlenosed dolphin)

Protein Percentage 89.19%
cDNA percentage 94.14%
Ka/Ks Ratio 0.70681 (Ka = 0.0559, Ks = 0.0792)

NFYA ENSBTAG00000009905 (Cow)

Gene Details

Nuclear transcription factor Y subunit alpha

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000013080, Cow)

Protein Percentage 89.19%
cDNA percentage 91.29%
Ka/Ks Ratio 0.28098 (Ka = 0.0562, Ks = 0.2002)

NFYA  (Minke Whale)

Gene Details

nuclear transcription factor Y, alpha

External Links

Gene match (Identifier: BACU012563, Minke Whale)

Protein Percentage 89.29%
cDNA percentage 94.05%
Ka/Ks Ratio 0.96225 (Ka = 0.0628, Ks = 0.0653)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 669 bp    Location:209807..209139   Strand:-
>bmy_18517
ATGCAGGTGGAGGGCCAGCAGGGCCAGACCCAGCAGGTCATCATCCAGCAGCCCCACAGAGCCATCACCGCTGGCCAGATGCAGACACAACAGCAGATTGCTGTCCAGGGGCAGCAAATGGCACAAACTGCCGAAGGGCAGACCATCGTCTACCAGCCAGTTAATGCAGATGGCACCATTCTCCAGCAAGGCATGATCACCAAACCTGCAGCCAGTTTGGCAGGAGCACAGATTGTCCAGACCGGAGCCAATGCCAACACAAGCAGCAGTGGGCAAGAGACTGTCACTCTGATACTACCAGTGGCAGGCAATGTGGTCAATTCAGGAGGGGTGGTCATGATGGTACCTGGTGCTGGCTCTGTGCCTGCAATCCAGAGCACCCCTCTCCCGGGGGCAGAGATGCTTCAAGAAGAGCCTCTCTATGTGAATGCCAAACAGTACCACCATATACTTAAGAGGGGGCAAGCCCGGGCTAAATTAGAGGCAGAAGGGAAAATTCCAAAGGAAAGAAGGAAATACCTGCATGAGTCTTGGCACCGTCATGCCATGGCATGGAAGCGTGGTGAAGGTGGACGATTTTTCTCTCTAAAGGAAAAAGATAGTCCCCATATGCAGGATCCAAATCAAGCAGGTGAAGAGGCTATGACACAGATAATCCGAGTGTCCTAA

Related Sequences

bmy_18517T0 Protein

Length: 223 aa      View alignments
>bmy_18517T0
MQVEGQQGQTQQVIIQQPHRAITAGQMQTQQQIAVQGQQMAQTAEGQTIVYQPVNADGTILQQGMITKPAASLAGAQIVQTGANANTSSSGQETVTLILPVAGNVVNSGGVVMMVPGAGSVPAIQSTPLPGAEMLQEEPLYVNAKQYHHILKRGQARAKLEAEGKIPKERRKYLHESWHRHAMAWKRGEGGRFFSLKEKDSPHMQDPNQAGEEAMTQIIRVS*