Sequence detailsbmy_18529 (Coding sequence)

Part of scaffold_1788 (SequenceType object (1))

For more information consult the page for scaffold_1788 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LHFPL1ENSTTRG00000003105 (Bottlenosed dolphin)

Gene Details

lipoma HMGIC fusion partner-like 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002909, Bottlenosed dolphin)

Protein Percentage 96.45%
cDNA percentage 96.06%
Ka/Ks Ratio 0.36091 (Ka = 0.0282, Ks = 0.0783)

LHFPL1ENSBTAG00000032485 (Cow)

Gene Details

lipoma HMGIC fusion partner-like 1 protein precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000043399, Cow)

Protein Percentage 97.04%
cDNA percentage 94.67%
Ka/Ks Ratio 0.14916 (Ka = 0.0229, Ks = 0.1537)

Additional orthologs identified in other species via the OPTIC pipeline.

LHFPL1 (Human)   Lhfpl1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 510 bp    Location:300357..309653   Strand:+
Raw sequence 
>bmy_18529
ATGAGGAGCAGCCTGACCCTGCTGGGGACCCTCTGGGCCTTTCTGTCCCTTGTTACCGCTGTGGCCAGTTCTACCAGTTACTTCCTGCCTTACTGGCTCTTTGGATCCCAGCTGGGGAAGCCAGTGTCATTCAGCACATTCCGGAGGTGCAACTACCCTGTGAGGGGAGAGGGGCAGAGTCTGATCATGGTGGAAGAGTGTGGGCGCTATGCCAGCTTCAGTGCCATCCCAAGCCTGGCCTGGCAGATGTGCACAGTGGTGACAGGTGCCGGCTGTGCTCTGCTGCTCCTGGTGGCACTGGCTGCTGTCCTAGGCTGCTGCATGGAGGAACTCATCTCCAGAATGATGGGACGTTGCATGGGAGCCGCACAGTTCGTGGGAGGACTGCTGATAAGCTCAGGCTGTGCATTATACCCCTTAGGATGGAATAGCCCGGAGATAATGCAAACATGTGGGAATGTCTCCAATCAATTTCAGTTAGGTAAGGTGGCCTGTGCAGGATGGCGGTGA

Related Sequences

bmy_18529T0 SequenceType object (3)

Length: 170 aa      View alignments
>bmy_18529T0
MRSSLTLLGTLWAFLSLVTAVASSTSYFLPYWLFGSQLGKPVSFSTFRRCNYPVRGEGQSLIMVEECGRYASFSAIPSLAWQMCTVVTGAGCALLLLVALAAVLGCCMEELISRMMGRCMGAAQFVGGLLISSGCALYPLGWNSPEIMQTCGNVSNQFQLGKVACAGWR*