Part of scaffold_1814 (Scaffold)

For more information consult the page for scaffold_1814 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ABCA1 ENSTTRG00000010446 (Bottlenosed dolphin)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009931, Bottlenosed dolphin)

Protein Percentage 88.58%
cDNA percentage 89.97%
Ka/Ks Ratio 0.43921 (Ka = 0.0769, Ks = 0.1751)

BT.89249 ENSBTAG00000020661 (Cow)

Gene Details

ATP-binding cassette sub-family A member 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027538, Cow)

Protein Percentage 92.17%
cDNA percentage 90.99%
Ka/Ks Ratio 0.18817 (Ka = 0.0502, Ks = 0.2665)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 6375 bp    Location:206050..345672   Strand:+
>bmy_18530
ATGGAGCCCATCCCCACTAATTTACATACCGTGGATGATTCTTCACGGTGCTCTGTCTTATTTCCCACTCAGTGTCAGCTATTGCTGGAAGTGGCCTGGCCTCTATTTATCTTCCTGATCCTGATCTCCGTGCGGCTGAGCTACCCACCCTATGAACAACATGAATATGCTCGGCGACTTCTTTTGTACAGCCACAGAGACACCAGCATGAAGAACATACGCCAAGTTCTAAGGACATTATACCGGATTGAGCGTTCCAGCTCAGCAGGCTTGAAGTTTCGGGACTTCCTGGTAGACAATGAAACCTTCTCTGGATTCCTGCATCACAACCTCTCTCTGCCAAGGCCAACTGTGGACAAGATGCTGGGGGCTGGTGTCAGTCTCCGCAAGGTATTTTTGCAAGGCTACCAGTTACATTTGACCAATCTGTGCAATGGATCAAAATTAGGAGAGCTGATTCGACTTGGTGACCAAGAAGTCTCCATGCTTTGCAGCCTGCCAAAGGAGAAACTGGATGCAGCAGAGCGAATACTTCATTCCAACCTGGACATTCTGAAGCCGATCCTGACAGAACTAAACTCCACATCTCCCTTCCCCAGCAAGGAGCTGGCTGAAGCCACAAAAACTTTGCTGGATAGTCTTGGGATTGTGGCTCAAGAGCTGTTCAGCATGAGGAGCTGGAGTGACATGCGGCAGGAGGTGATGTTTCTGACCAACGTGAATAGCTCCAGCTCCTCCACGCAGATCTACCAGGCCGTGTCCCGCATCGTCTGTGGCCATCCCGAGGGTGGGGGCCTGAAGATCAAGTCCCTTAACTGGTATGAGGACAACAACTACAAAGCCCTCTTTGGAGGCAACAGCACTGAGGACGATGCCGGCACCTTCTATGACAATTCGACAAGTGAGTCTCTCAAGCCCCTACTTGTTGGGAAGATCCTGTATACACCTGACACTCCAGTCACAAGGCAGGTTATGGCTGAGGTGAATAAGACCTTCCAGGAACTGGCTGTGTTTCATGATCTGCAAGGCATGTGGCAAGAGCTCAGCCCCAACATCTGGACCTTCCTGGAGAGCAGCCCAGAAATGGACCTTGTCCGGGTGAGTGTCCCTCTGATTGCCTGTGTGAACCTGAACAAGCTGGAACCAGTGGCAACAGAGGTTCTGCTCATCAACAAGTCCATGGAGCTGCTGGATGAGCGGAAGTTCTGGGCTGGGATCGTGTTCACTGGAATTGCTCCTGGCAGTGTCGAGCTGCCCCATCACGTCAAGTACAAGATCCGGATGGATATCGACAATGTGGAGAGGACGAATAAGATCAAGGATGGGTACTGGGACCCCGGTCCTCGGGCTGACCCCTTTGAGGATATGCGGTACGTCTGGGGGGGCTTCGCGTACTTGCAGGATGTGGTGGAGCAGGCGATCATCAGGGTGCTGACGGGCACAGAGAAGAAAACCGGCATCTACATGCAGCAGATGCCTTACCCCTGTTACGTTGACGACATCTTCCTGCGGGTCATGAGCCGGTCAATGCCCCTCTTCATGACGTTGGCCTGGATTTACTCTGTGGCTGTGATCATCAAGGGCATCGTGTACGAGAAGGAGGCGCGGCTGAAGGAGACCATGCGCATCATGGGCCTGGACAACAGCATCCTCTGGTTCAGCTGGTTCATCAGCAGCCTCATCCCCCTGCTCGTGAGCGCCGGCCTGCTGGTGGTCATCCTGAAATTAGGAAACCTGCTGCCCTACAGCGACCCCAGTGTGGTGTTTGTCTTTCTGTCCGTGTTCGCCGTGGTGACCATCCTGCAGTGCTTTCTGATCAGCACGCTCTTCTCCAGAGCCAACCTGGCGGCAGCCTGTGGAGGCATCATTTACTTCATGCTGTACCTGCCCTACGTCCTGTGCGTGGCGTGGCAAGACTACGTGGGCTTCACACTCAAGATCTTTGCGAGCCTGCTGTCTCCTGTGGCTTTTGGGTTTGGCTGTGAGTACTTTGCCCTTTTTGAGGAGCAGGGCATTGGGGTGCAATGGGACAACCTTTTTGAGAGCCCTGTGGAGGAAGATGGCCTCAACCTCACCACCTCGGTCTCCATGATGCTGTTTGACGCCTTCCTCTACGGGGTGATGACGTGGTACATCGAGGCTGTGTTTCCAGGCCAATATGGAATCCCCAGGCCCTGGTATTTCCCTTGTACTAAGTCCTACTGGTTTGGCGAGGAAAGCAATGAGAAGAGCCACCCTGGTTCCATCCAGAAGGGAACGTCAGAAATCTGCATGGAGGAGGAACCCACCCACCTGAAGCTGGGCGTGTCCATTCAGAACCTGATGAAGGTTTACCGAGATGGCATGAAGGTGGCAGTTGATGGCCTGGCCTTGAATTTCTACGAGGGCCAGATCACCTCCTTCCTGGGCCACAATGGAGCTGGGAAGACCACCACCATGTCAATCCTGACTGGGTTGTTCCCTCCCACCTCGGGCACTGCCTACATCCTGGGGAAAGACATTCGCTCCGAGATGAACACCATCCGGCAGAACCTGGGGGTCTGTCCCCAGCATAACGTGCTGTTTGACATGCTGACTGTTGAAGAGCACATCTGGTTTTACGCCCGCCTGAAAGGGCTCTCGGAGAAGCACGTGAAAGCAGAGATGGAGCAGATGGCCCTGGATGTTGGTTTGCCGCCAAGCAAACTGAAAAGCAAAACAAGTCAGCTGTCAGGTGGAATGCAGAGAAAGCTGTCTGTGGCCTTGGCCTTTGTCGGGGGATCCAAGGTTGTCATTCTGGATGAGCCCACAGCCGGTGTGGACCCTTACTCCCGCAGGGGAATATGGGAGCTGCTGCTGAAATATCGACAAGGCCGCACCATTATTCTCTCCACACACCACATGGATGAAGCGGACATCCTGGGGGACAGGATTGCCATCATTTCCCATGGGAAGCTGTGCTGCGTGGGCTCCTCCCTGTTCCTGAAGAACCAGCTGGGGACAGGTTACTACCTGACCCTGGTCAAGAAGGACGTGGAGTCCTCCCTCAGCTCGTGCAGAAATAGCAGTAGCACTGTGTCGTACCTGAAAAAGGAGGACAGTGTTTCTCAGAGCAGTTCTGATGCTGGCCTGGGCAGCGACCATGAGAGTGACACGCTGACCGTCGATGTCTCCGCGATCTCCAACCTCATCAGGAAGCATGTGGCCGAGGCCCGGCTGGTGGAAGACATTGGGCATGAGCTGACCTACGTGCTGCCCTATGAAGCCGCCAAAGAGGGGGCCTTTGTGGAACTCTTCCATGAGATTGATGACCGGCTCTCAGACCTGGGCATTTCCAGTTATGGAATCTCAGAGACTACCCTGGAAGAAATATTTCTCAAAGTGGCTGAAGAGAGTGGGGTGGATGCTGAGACCTCAGATGGCACCCTACCGGCAAGACGAAACAGACGGGTCTTCGGGGACAAGCAGAGCTGTCTTCGCCCATTTACTGAAGATGATGCTGTTGATCCGAATGATTCCGACATAGATCCAGAATCCAGAGAAACAGACCTGCTCAGCGGGATGGACGGCAAAGGCTCCTACCAGGTGAAGGGCTGGAAACTCACACAGCAGCAGTTTGGGGCGCTTTTGTGGAAGAGGCTGCTGATTGCCAGACGGAGTCGGAAGGGATTCTTTGCTCAGATTGTCCTGCCGGCTGTGTTTGTCTGCATTGCCCTGGTGTTCAGCTTGATCGTGCCACCCTTTGGCAAGTACCCCAGCCTGGAACTTCAGCCCTGGATGTACAACGAACAGTACACATTTGTCAGTAATGATGCTCCTGAGGACGTGAGCACCCAGGAACTCTTGAGTGCTCTCACTGGAAAGCCTGGCTTCGGGACCCGATGTATGGAAGGAAACCCAATCCCAGACATGCCCTGCTCGGTGGGGGAGAAGGAGTGGACCACCACCCCAGTCTCCCAGACCATCACGGACCTCTTCAGAAATGGGAACTGGACGATGGAGAACCCCTCCCCCACCTGCCAGTGTAGCAGCGACAAAATCAAGAAGATGCTGCCCGTGTGTCCCCTGGGGGCTGGGGGGCTGCCTCCTCCACAAAGAAAACAGAACACTGCGGACATCCTTCAGAACCTGACGGGAAGAAACATTTCGGATTATCTGGTGAAGACATATGTGCAGATCATAGCCAAAAGCTTAAAGAACAAGATTTGGGTGAACGAGTTTAGGTACGGTGGATTTTCCCTGGGTGCCAGTAATTCTAAATCACTTCCTCCGAGTGAAGAAGTTAATGATGCCATCAAGCAAATGAAGAAACACTTGAAGGTGGCCAAGGTGTGGTTCAACAACAAGGGCTGGCACGCCATCAGCTCTTTCTTGAATGTCATCAACAATGCCATTCTCCGGGCCAACCTGCAGAAGGGAGAGAACCCTAGCCAGTATGGGATTACTGCCTTCAATCACCCCCTGAACCTCACCAAGCAGCAGSTCTCGGAAGTGGCTCTGATGACCACATCAGTGGACGTCCTCGTGTCCATCTGTGTCATCTTTGCGATGTCCTTCGTCCCGGCCAGCTTTGTCGTGTTCCTGATCCAGGAGCGGGTCAGCAAAGCGAAGCACCTGCAGTTCATCAGCGGAGTGAAGCCTGTCATCTACTGGCTCTCCAATTTTGTCTGGGACATGTGCAACTATGTGGTCCCTGCCACGCTGGTCATTATCATCTTCATCTGCTTCCAGCAGAAGTCCTATGTGTCCTCCACCAACCTGCCTGTGCTAGCCCTTCTACTGTTGCTGTATGGGTGGTCCATCACACCTCTCATGTACCCAGCCTCCTTTGTGTTCAAGATCCCCAGCACAGCCTACGTGGTCCTCACCAGCGTGAACCTCTTCATCGGCATCAATGGCAGCGTGGCCACTTTTAAGCTGAATAACATCAATGATATCCTGAAGTCGGTGTTCTTGATCTTCCCACATTTTTGCCTGGGACGGGGGCTCATTGACATGGTGAAAAACCAGGCAATGGCTGATGCCTTGGAAAGGTTTGGGGAGAATCGCTTTGTCTCGCCACTGTCTTGGGACTTGGTGGGACGAAACCTCTTCGCCATGGCCGTGGAAGGGGTGGTGTTCTTCCTCATCACTGTGTTGATCCAGTACCGATTCTTCATCAGGCCCAGACCTGTAATGGCAAAGCTTCCTCCTCTGAATGATGAGGATGAAGATGTGAGGAGGGAGAGACAGAGAATTCTTGATGGTGGAGGACAGAATGACATCTTGGAAGTCAAGGAGCTGACTAAGGTATATAGAAGGAAGAGGAAACCTGCCGTCGACAGGATTTGCATTGGCATTCCTCCTGGTGAGTGCTTTGGACTTCTAGGTGTCAATGGGGCTGGGAAATCATCAACTTTCAAGATGTTAACGGGAGATACCACTGTTACCAGAGGAGATGCTTTTCTTAACAAAAATAGTATCTTATCAAACATCCACGAAGTACATCAGAACATGGGCTATTGCCCTCAGTTCGATGCCATCACAGAGCTGCTGACTGGAAGAGAACACGTGGAGTTCTTGGCGCTCTTGAGAGGCGTCCCAGAGAGAGAAGTCGGCAAGGTTGGTGAGTGGGCAATTCGGAAACTGGGCCTCGTGAAGTATGGAGAAAAATATGCTGGGGACTATAGCGGAGGCAATAAGCGCAAGCTCTCGACGGCCATGGCTTTGATTGGCGGGCCTCCTGTCGTGTTTCTGGTGAGTGTGACTGTGAATGGAAAACTTTGTTCTGGCCTGAATGGAAGACATCTCTTTTCTAAAGTCCTCGATGTCCAGGCCGTGCATGACTGGCTTGGCAATGGCAAGCCCCCCTCCCCCGATGAGGAACAGCAGGGCAGCCTCAGAGAACCAGAGGGAAGCTCCCTTGCCCCTCTCCTTGACACACATTGGGGTGGCTCTGACATGCCCTCAGATGCTCCAAAAGAGGAGATACTCCAGGGACCTTGTTTCTCTAGCATGGAGAACCCCAACAGGTTTGGAGATGGTTATACAATAGTCGTACGAATAGCAGGGTCCAGCCCTGACCTGAAGCCTGTCCAGGAGTTCTTTGAACTCGCCTTCCCAGGAAGCGTGCTGAAGGAGAAGCACCGGAACATGCTGCAGTACCAGCTTCCCTCTTCACTGTCTTCCCTGGCCAGGATTTTCAGCATCCTTTCCCAGAGCAAAAAGCGACTCCACATAGAAGACTACTCTGTCTCTCAGACAACACTTGACCAAGTATTTGTAAACTTTGCCAAGGACCAAAGTGATGATGACCACTTAAAGGACCTGTCATTACACAAAAACCAGACAGTGGTGGATGTTGCAGTTCTCACATCTTTTCTGCAGGATGAGAAAGTGAAAGAAAGTTGTGTATGA

Related Sequences

bmy_18530T0 Protein

Length: 2125 aa      View alignments
>bmy_18530T0
MEPIPTNLHTVDDSSRCSVLFPTQCQLLLEVAWPLFIFLILISVRLSYPPYEQHEYARRLLLYSHRDTSMKNIRQVLRTLYRIERSSSAGLKFRDFLVDNETFSGFLHHNLSLPRPTVDKMLGAGVSLRKVFLQGYQLHLTNLCNGSKLGELIRLGDQEVSMLCSLPKEKLDAAERILHSNLDILKPILTELNSTSPFPSKELAEATKTLLDSLGIVAQELFSMRSWSDMRQEVMFLTNVNSSSSSTQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDAGTFYDNSTSESLKPLLVGKILYTPDTPVTRQVMAEVNKTFQELAVFHDLQGMWQELSPNIWTFLESSPEMDLVRVSVPLIACVNLNKLEPVATEVLLINKSMELLDERKFWAGIVFTGIAPGSVELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVLTGTEKKTGIYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNSILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFVFLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFMLYLPYVLCVAWQDYVGFTLKIFASLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGLNLTTSVSMMLFDAFLYGVMTWYIEAVFPGQYGIPRPWYFPCTKSYWFGEESNEKSHPGSIQKGTSEICMEEEPTHLKLGVSIQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYILGKDIRSEMNTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVGLPPSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLSSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTVDVSAISNLIRKHVAEARLVEDIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAETSDGTLPARRNRRVFGDKQSCLRPFTEDDAVDPNDSDIDPESRETDLLSGMDGKGSYQVKGWKLTQQQFGALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQPWMYNEQYTFVSNDAPEDVSTQELLSALTGKPGFGTRCMEGNPIPDMPCSVGEKEWTTTPVSQTITDLFRNGNWTMENPSPTCQCSSDKIKKMLPVCPLGAGGLPPPQRKQNTADILQNLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSKSLPPSEEVNDAIKQMKKHLKVAKVWFNNKGWHAISSFLNVINNAILRANLQKGENPSQYGITAFNHPLNLTKQQXSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFKLNNINDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVMAKLPPLNDEDEDVRRERQRILDGGGQNDILEVKELTKVYRRKRKPAVDRICIGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSNIHEVHQNMGYCPQFDAITELLTGREHVEFLALLRGVPEREVGKVGEWAIRKLGLVKYGEKYAGDYSGGNKRKLSTAMALIGGPPVVFLVSVTVNGKLCSGLNGRHLFSKVLDVQAVHDWLGNGKPPSPDEEQQGSLREPEGSSLAPLLDTHWGGSDMPSDAPKEEILQGPCFSSMENPNRFGDGYTIVVRIAGSSPDLKPVQEFFELAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESCV*