Sequence detailsbmy_18538 (Coding sequence)

Part of scaffold_1807 (SequenceType object (1))

For more information consult the page for scaffold_1807 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

S100A10ENSTTRG00000008647 (Bottlenosed dolphin)

Gene Details

S100 calcium binding protein A10

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008194, Bottlenosed dolphin)

Protein Percentage 98.97%
cDNA percentage 98.63%
Ka/Ks Ratio 0.16297 (Ka = 0.0052, Ks = 0.0321)

S100A10ENSBTAG00000015147 (Cow)

Gene Details

Protein S100-A10

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000020150, Cow)

Protein Percentage 98.97%
cDNA percentage 95.88%
Ka/Ks Ratio 0.02243 (Ka = 0.0044, Ks = 0.1975)

Additional orthologs identified in other species via the OPTIC pipeline.

S100A10 (Human)   S100a10 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 459 bp    Location:102104..113656   Strand:+
Raw sequence 
>bmy_18538
CCGGCCCAGGCTCCTCCTGCCTCCCCCGCTCCCCGCCCCCACTTACTAAGGCGCCCAGCCCGCGGCGCTCTGCTCACTGGCCGCGCGTCCCCGCCAGCCGAGCGCCCCCGCCAGCCGAGCGTCCCCGCCGCGCCTCCTGCCACGGTTCCAACAGACCTCACCAAAATGCCCTCTCAAATGGAACACGCCATGGAAACCATGATGTTCACATTTCACAAATTTGCTGGGGATAAAGGCTACTTAACAAAGGAGGACCTGAGAGTACTCATGGAAAAGGAGTTCCCTGGATTTTTGGAAAATCAAAAAGACCCTCTGGCTGTGGACAAAATAATGAAGGACCTGGACCAGTGCCGAGATGGCAAAGTGGGCTTCCAGAGCTTCTTTTCACTAATCGCTGGGCTCACCATCGCATGCAATGACTATTTTGTAGTACACATGAAGCAGAGGGGAAAGAAGTAG

Related Sequences

bmy_18538T0 SequenceType object (3)

Length: 153 aa      View alignments
>bmy_18538T0
PAQAPPASPAPRPHLLRRPARGALLTGRASPPAERPRQPSVPAAPPATVPTDLTKMPSQMEHAMETMMFTFHKFAGDKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTIACNDYFVVHMKQRGKK*