Sequence detailsbmy_18545 (Coding sequence)

Part of scaffold_1807 (SequenceType object (1))

For more information consult the page for scaffold_1807 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LINGO4ENSTTRG00000003150 (Bottlenosed dolphin)

Gene Details

leucine rich repeat and Ig domain containing 4

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002953, Bottlenosed dolphin)

Protein Percentage 96.27%
cDNA percentage 97.18%
Ka/Ks Ratio 0.29945 (Ka = 0.018, Ks = 0.0602)

LINGO4ENSBTAG00000040596 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000050839, Cow)

Protein Percentage 92.24%
cDNA percentage 90.84%
Ka/Ks Ratio 0.13116 (Ka = 0.0412, Ks = 0.3139)

Additional orthologs identified in other species via the OPTIC pipeline.

LINGO4 (Human)   Lingo4 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1782 bp    Location:284322..286103   Strand:+
Raw sequence 
>bmy_18545
ATGGCTGCGGCCACTACTCCAAAGCAAGCCTGGCCCCCGTGGCCCCCCATCTTTTTCCTGCTCCTCCTGTCTGGGGGGAGCAGCGGCGGCTGCCCTGCTGTGTGTGACTGCACCTCCCAACCCCGGGCAGTGCTCTGTGCCCAGCGGCGACTGGAGGCTGTACCAGGGGGACTCCCGCTGGACACCGAGCTCCTGGACCTGAGTGGGAACCGCCTATGGGGGCTTCAGCGGGGAATGCTCTCCCACCTGGGCCTGCTCCGGGAACTGGACCTCAGCTATAACCAGCTGTCCACCCTCGAGCCAGGGGCCTTCCATGGTCTGCAGGGCCTGCTCACCCTGAGGCTGCAGGGCAACCGTCTGCGAATCATGGGCCCCGGGGTCTTCTCAGGCCTGTCTGCCCTCACGCTGCTGGACATTCGCCTCAACCAGATTGTCCTCTTCCTCGATGGAGCTTTCGGGGAGCTAGGCAGCCTCCAGCAGCTTGAGGCTGGGGACAACCACCTGGTGTTTGTGGCTCCGGGAGCCTTTGCTGGACTGGCCAAGCTGAGCACCCTCACCCTGGAGCGCTGCAACCTCAGCACCGTGCCTGGCCCGGCCCTGGCCCGCCTCCCAGCGCTAGGCGCCCTAAGGCTCCGAGAATTAGATATTGGGAGGCTCCCGGGAGGGGTGCTGCGAGGGCTGGGGCAGCTAAAGGAGCTGGAGATCCATCACTGGCCATCTCTGGAGGCTCTGGAGCCTGGGAGCCTGACTGGGCTCAATCTCAGCAGCTTGGCCATCACCCGCTGCAATCTGAGCTCGGTGCCCTTCCAAGCGCTGCACCACCTGAGCTTCCTCAGGGTCCTGGATCTGTCTCAGAATCCCATCTCTGCCATCCCGGCCCAGAGGCTCAGCCCCCTGGTGCGGCTCCAGGAGCTCCGACTGTCAGGGGCATGCCTCACCTCCATCGCTGCCCACGCCTTCCATGGCTTGACTGCCTTCCACCTCCTAGACGTGGCGGATAACGCCCTTCAGACACTGGAGGAAACAGCCTTCCCTTCTCCAGACAAATTGGTCACCCTGAGGCTGTCTGGTAACCCCCTGACCTGTGACTGCCGCCTCGTCTGGCTGCTCCGGCTCCACCGCCACCTGGACTTTGGCACGTCCCCCCCTGCCTGTGCCAGCCCCCAGCACGTCCAGGGGAAGAGTCTGAGGGAGTTTTTAGACATCCTACCTCCAGGGCACTTCACTTGCCAACCAGCCCTGATCCGAAAGTCCGGGCCACGATGGGTCATTGCAGAGGAGGGGGGGCATGCCGTTTTCTCCTGCTCTGGGGATGGAGACCCAGCCCCCATCGTCTCCTGGATGAGGCCTCAGGGGGCTTGGCTGGGAAGGGCCGGGAGAGTAAGGGTCCTGGAGGATGGGACGCTGGAGATCCGCTCCGTGCAGCTACGAGATAGAGGGGCCTATGTCTGTGTGGTCAGCAATGTAGCTGGGAATGACTCCCTGAGGACCTGGCTGGAAGTAATCCAAGTTGAACCACCAAATAGCACTCTCTCTGACCCCAACATCACCATGCCAGGGATCCCAGGGCCTTTCTTGCTGGATAGCAGAGGCATAGCTATGGTGCTGGCAGTCGGCTTCCTCCCCTTCCTCACCTCAGTAACCCTGTGCTTTGGCCTCATTGCCCTCTGGAGCAAAGGCAAAGGCCGGGTCAAACATCACATGACCTTTGACTTTGTGGCACCCCGAACCTCTGGGGATAAGAACTCTGGGGGTAACCGGGTCACTGCCAAGCTCTTCTGA

Related Sequences

bmy_18545T0 SequenceType object (3)

Length: 594 aa      View alignments
>bmy_18545T0
MAAATTPKQAWPPWPPIFFLLLLSGGSSGGCPAVCDCTSQPRAVLCAQRRLEAVPGGLPLDTELLDLSGNRLWGLQRGMLSHLGLLRELDLSYNQLSTLEPGAFHGLQGLLTLRLQGNRLRIMGPGVFSGLSALTLLDIRLNQIVLFLDGAFGELGSLQQLEAGDNHLVFVAPGAFAGLAKLSTLTLERCNLSTVPGPALARLPALGALRLRELDIGRLPGGVLRGLGQLKELEIHHWPSLEALEPGSLTGLNLSSLAITRCNLSSVPFQALHHLSFLRVLDLSQNPISAIPAQRLSPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLTCDCRLVWLLRLHRHLDFGTSPPACASPQHVQGKSLREFLDILPPGHFTCQPALIRKSGPRWVIAEEGGHAVFSCSGDGDPAPIVSWMRPQGAWLGRAGRVRVLEDGTLEIRSVQLRDRGAYVCVVSNVAGNDSLRTWLEVIQVEPPNSTLSDPNITMPGIPGPFLLDSRGIAMVLAVGFLPFLTSVTLCFGLIALWSKGKGRVKHHMTFDFVAPRTSGDKNSGGNRVTAKLF*