Part of scaffold_1807 (Scaffold)

For more information consult the page for scaffold_1807 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TDRKH ENSTTRG00000003149 (Bottlenosed dolphin)

Gene Details

tudor and KH domain containing

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002952, Bottlenosed dolphin)

Protein Percentage 87.23%
cDNA percentage 89.09%
Ka/Ks Ratio 0.85965 (Ka = 0.0472, Ks = 0.0549)

TDRKH ENSBTAG00000021594 (Cow)

Gene Details

tudor and KH domain-containing protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028777, Cow)

Protein Percentage 89.73%
cDNA percentage 91.41%
Ka/Ks Ratio 0.3823 (Ka = 0.0644, Ks = 0.1684)

TDRKH  (Minke Whale)

Gene Details

tudor and KH domain containing

External Links

Gene match (Identifier: BACU007262, Minke Whale)

Protein Percentage 95.86%
cDNA percentage 96.88%
Ka/Ks Ratio 0.73953 (Ka = 0.0285, Ks = 0.0386)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1887 bp    Location:308828..316339   Strand:+
>bmy_18546
ATGTCCACTGAACGGACTTCTTGGACAAGTTTGTCCACTATTCAGAAAATAGCACTGGGCCTCGGGATCCCAGCCAGTGCAGTGGTTGCCTATATCCTATACCGCAGATATAGGGAAAGCAGAGAAGAGCGGCTGACATTTGTTGGGGAGGATGACATCGAGATAGAGATGCGAGTCCCCCAGGAGGCTGTGAAGCTCATCATTGGCCGGCAAGGAGCCAATATTAAGCAGCTACGAAAACAGACAGGTGCTCGGATCGATGTGGACACAGAGGATGTAGGAGATGAGCGGGTGCTGCTTATCAGTGGTTTTCCTGTTCAGGTGTGCAAGGCCAAAGCAGCAATTCATCAGATCCTGACTGAGAGTACCCCAGTGTCTGAGCAGCTCTCAGTTCCCCAGAGATCTGTGGGCAGAATCATAGGGAGAGGCGGCGAGACAATTCGTTCTATCTGTAAGGCCTCGGGAGCCAAAGTAACCTGTGACAAAGAATCAGAGGGGACATTGCTACTATCAAGACTTATAAAAATCTCAGGAACACAGAAGGAGCATTTGATACTGGAGAAAGTTTTAGAAGATGAAGAACTTAGGAAGAGAATTGCTTATTCTGCAGAAACCAGAGTCCCACGGAAGCAGCCAATCAGCGTAAGAAGAGAGGAAGTGACAGAGCCAGCTGGGGCTGGAGAGCCAGCTTTATGGAAAAACACTGGCACTAGCTTGGAGAAGGCTGCACCTCTGGCAGTTCCTCCCCACAAAGGAGGTGGYGACACGTCTGTTGTAGGACCAGAAGAGCGTTCCTGCGAGAAACCTAATGATGACAACTTTCAGAAGTTTGGAGCCCAGACCAGTCCAGAGACATCCATGTTTGAAATCCCCAGTCCGGACTTCAGTTTCCCTGCTGATGAATTCCTAGAAGTCTATGTCTCTGCCTCTGAACATCCTAACCACTTCTGGATCCAAATCATTGGCTCCCGCAGCCTGCAACTGGATAAGCTTGTCAGTGAGATGACCCAGCACTATGAAAATAGTCTGCCTGAAGACTTGACTGTACATGTAGGAGACATTGTTGCAGCACCTTTACCTACAAATGGTTCCTGGTATCGAGCCCGGGTCCTTGGCACCTTGGAGAATGGGAACCTGGACCTCTACTTCGTTGACTTTGGAGATAATGGAGATTGCCCACTGAGGGAYCTCAGGGTGCTCAGGAGTGACTTCCTAAGCCTTCCATTTCAAGCAATAGAGTGTAGTCTGGCACGGATAGCCCCCTCAGGACATAATCCCACCCCCGTCAGCACTGACCCCTTCTTAGGCTCTCTCTACGATTTTTTACGAGGTGAACAATGGGAAGAGGAAGCTTTGGATGAGTTTGACAGACTCACTCACTGTGCTGACTGGAAGCCCCTGGTGGCCAAGATCTCTAGCTACGTCCAGTCTGGGATCTCAACTTGGCCCAAGATCCACTTATATGATACTAGCAATGGGAAGAAACTTGATGTTGGGTTAGAATTAGTTCGTAAAGGATACGCAGTTGAGCTTCCTGAAGACATGGAAGAAAACAGAGCTGTCCCAGTAATGTTGCACGGTGTGGCCACAGAAACAGATGTCTCTCTCCGCAGCACTGTCACTGAGACCAAGAAGAGCCCTGGAGAGATGGCAAATACCCTGTCCTGCCTCAGTTTATTAGGATTTGGCATAAGATTTGGTGCCTGGAGAGAGGAGCCTGTGATAAAGATCAGTGCACTTCTTCCTTCATTATATACACGATCTGGCTTGCTTTGGACCAAATGCATTTGCTCCTTCCACTGGACTACCAGAAAGTGTGAGGGGTGGAGGGAGACAAACACATGCCCCTACTCCACCACCACCCCCTGCGCCCCTTCCAGTGTTTGA

Related Sequences

bmy_18546T0 Protein

Length: 629 aa      View alignments
>bmy_18546T0
MSTERTSWTSLSTIQKIALGLGIPASAVVAYILYRRYRESREERLTFVGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLISGFPVQVCKAKAAIHQILTESTPVSEQLSVPQRSVGRIIGRGGETIRSICKASGAKVTCDKESEGTLLLSRLIKISGTQKEHLILEKVLEDEELRKRIAYSAETRVPRKQPISVRREEVTEPAGAGEPALWKNTGTSLEKAAPLAVPPHKGGGDTSVVGPEERSCEKPNDDNFQKFGAQTSPETSMFEIPSPDFSFPADEFLEVYVSASEHPNHFWIQIIGSRSLQLDKLVSEMTQHYENSLPEDLTVHVGDIVAAPLPTNGSWYRARVLGTLENGNLDLYFVDFGDNGDCPLRDLRVLRSDFLSLPFQAIECSLARIAPSGHNPTPVSTDPFLGSLYDFLRGEQWEEEALDEFDRLTHCADWKPLVAKISSYVQSGISTWPKIHLYDTSNGKKLDVGLELVRKGYAVELPEDMEENRAVPVMLHGVATETDVSLRSTVTETKKSPGEMANTLSCLSLLGFGIRFGAWREEPVIKISALLPSLYTRSGLLWTKCICSFHWTTRKCEGWRETNTCPYSTTTPCAPSSV*