Sequence detailsbmy_18546 (Coding sequence)

Part of scaffold_1807 (SequenceType object (1))

For more information consult the page for scaffold_1807 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TDRKHENSTTRG00000003149 (Bottlenosed dolphin)

Gene Details

tudor and KH domain containing

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002952, Bottlenosed dolphin)

Protein Percentage 87.23%
cDNA percentage 89.09%
Ka/Ks Ratio 0.85965 (Ka = 0.0472, Ks = 0.0549)

TDRKHENSBTAG00000021594 (Cow)

Gene Details

tudor and KH domain-containing protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000028777, Cow)

Protein Percentage 89.73%
cDNA percentage 91.41%
Ka/Ks Ratio 0.3823 (Ka = 0.0644, Ks = 0.1684)

TDRKH (Minke Whale)

Gene Details

tudor and KH domain containing

External Links

Gene match (Identifier: BACU007262, Minke Whale)

Protein Percentage 95.86%
cDNA percentage 96.88%
Ka/Ks Ratio 0.73953 (Ka = 0.0285, Ks = 0.0386)

Additional orthologs identified in other species via the OPTIC pipeline.

TDRKH (Human)   Tdrkh (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1887 bp    Location:308828..316339   Strand:+
Raw sequence 
>bmy_18546
ATGTCCACTGAACGGACTTCTTGGACAAGTTTGTCCACTATTCAGAAAATAGCACTGGGCCTCGGGATCCCAGCCAGTGCAGTGGTTGCCTATATCCTATACCGCAGATATAGGGAAAGCAGAGAAGAGCGGCTGACATTTGTTGGGGAGGATGACATCGAGATAGAGATGCGAGTCCCCCAGGAGGCTGTGAAGCTCATCATTGGCCGGCAAGGAGCCAATATTAAGCAGCTACGAAAACAGACAGGTGCTCGGATCGATGTGGACACAGAGGATGTAGGAGATGAGCGGGTGCTGCTTATCAGTGGTTTTCCTGTTCAGGTGTGCAAGGCCAAAGCAGCAATTCATCAGATCCTGACTGAGAGTACCCCAGTGTCTGAGCAGCTCTCAGTTCCCCAGAGATCTGTGGGCAGAATCATAGGGAGAGGCGGCGAGACAATTCGTTCTATCTGTAAGGCCTCGGGAGCCAAAGTAACCTGTGACAAAGAATCAGAGGGGACATTGCTACTATCAAGACTTATAAAAATCTCAGGAACACAGAAGGAGCATTTGATACTGGAGAAAGTTTTAGAAGATGAAGAACTTAGGAAGAGAATTGCTTATTCTGCAGAAACCAGAGTCCCACGGAAGCAGCCAATCAGCGTAAGAAGAGAGGAAGTGACAGAGCCAGCTGGGGCTGGAGAGCCAGCTTTATGGAAAAACACTGGCACTAGCTTGGAGAAGGCTGCACCTCTGGCAGTTCCTCCCCACAAAGGAGGTGGYGACACGTCTGTTGTAGGACCAGAAGAGCGTTCCTGCGAGAAACCTAATGATGACAACTTTCAGAAGTTTGGAGCCCAGACCAGTCCAGAGACATCCATGTTTGAAATCCCCAGTCCGGACTTCAGTTTCCCTGCTGATGAATTCCTAGAAGTCTATGTCTCTGCCTCTGAACATCCTAACCACTTCTGGATCCAAATCATTGGCTCCCGCAGCCTGCAACTGGATAAGCTTGTCAGTGAGATGACCCAGCACTATGAAAATAGTCTGCCTGAAGACTTGACTGTACATGTAGGAGACATTGTTGCAGCACCTTTACCTACAAATGGTTCCTGGTATCGAGCCCGGGTCCTTGGCACCTTGGAGAATGGGAACCTGGACCTCTACTTCGTTGACTTTGGAGATAATGGAGATTGCCCACTGAGGGAYCTCAGGGTGCTCAGGAGTGACTTCCTAAGCCTTCCATTTCAAGCAATAGAGTGTAGTCTGGCACGGATAGCCCCCTCAGGACATAATCCCACCCCCGTCAGCACTGACCCCTTCTTAGGCTCTCTCTACGATTTTTTACGAGGTGAACAATGGGAAGAGGAAGCTTTGGATGAGTTTGACAGACTCACTCACTGTGCTGACTGGAAGCCCCTGGTGGCCAAGATCTCTAGCTACGTCCAGTCTGGGATCTCAACTTGGCCCAAGATCCACTTATATGATACTAGCAATGGGAAGAAACTTGATGTTGGGTTAGAATTAGTTCGTAAAGGATACGCAGTTGAGCTTCCTGAAGACATGGAAGAAAACAGAGCTGTCCCAGTAATGTTGCACGGTGTGGCCACAGAAACAGATGTCTCTCTCCGCAGCACTGTCACTGAGACCAAGAAGAGCCCTGGAGAGATGGCAAATACCCTGTCCTGCCTCAGTTTATTAGGATTTGGCATAAGATTTGGTGCCTGGAGAGAGGAGCCTGTGATAAAGATCAGTGCACTTCTTCCTTCATTATATACACGATCTGGCTTGCTTTGGACCAAATGCATTTGCTCCTTCCACTGGACTACCAGAAAGTGTGAGGGGTGGAGGGAGACAAACACATGCCCCTACTCCACCACCACCCCCTGCGCCCCTTCCAGTGTTTGA

Related Sequences

bmy_18546T0 SequenceType object (3)

Length: 629 aa      View alignments
>bmy_18546T0
MSTERTSWTSLSTIQKIALGLGIPASAVVAYILYRRYRESREERLTFVGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLISGFPVQVCKAKAAIHQILTESTPVSEQLSVPQRSVGRIIGRGGETIRSICKASGAKVTCDKESEGTLLLSRLIKISGTQKEHLILEKVLEDEELRKRIAYSAETRVPRKQPISVRREEVTEPAGAGEPALWKNTGTSLEKAAPLAVPPHKGGGDTSVVGPEERSCEKPNDDNFQKFGAQTSPETSMFEIPSPDFSFPADEFLEVYVSASEHPNHFWIQIIGSRSLQLDKLVSEMTQHYENSLPEDLTVHVGDIVAAPLPTNGSWYRARVLGTLENGNLDLYFVDFGDNGDCPLRDLRVLRSDFLSLPFQAIECSLARIAPSGHNPTPVSTDPFLGSLYDFLRGEQWEEEALDEFDRLTHCADWKPLVAKISSYVQSGISTWPKIHLYDTSNGKKLDVGLELVRKGYAVELPEDMEENRAVPVMLHGVATETDVSLRSTVTETKKSPGEMANTLSCLSLLGFGIRFGAWREEPVIKISALLPSLYTRSGLLWTKCICSFHWTTRKCEGWRETNTCPYSTTTPCAPSSV*