Sequence details bmy_18552 (Coding sequence)

Part of scaffold_1807 (Scaffold)

For more information consult the page for scaffold_1807 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNX27 ENSTTRG00000011477 (Bottlenosed dolphin)

Gene Details

sorting nexin family member 27

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010883, Bottlenosed dolphin)

Protein Percentage 99.56%
cDNA percentage 99.26%
Ka/Ks Ratio 0.14818 (Ka = 0.0024, Ks = 0.0162)

Additional orthologs identified in other species via the OPTIC pipeline.

SNX27 (Cow)   SNX27 (Human)   Snx27 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 675 bp    Location:420463..403150   Strand:-
Raw sequence 
>bmy_18552
ATGGCAGGGAGGCAGTTGTGTTCTAAGCGGTACCGGGAGTTTGCCATCCTACACCAGAACCTGAAGAGAGAGTTTGCCAACTTTACATTTCCCCGACTTCCAGGGAAGTGGCCATTCTCTTTATCAGAACAGCAATTAGATGCCCGACGTCGGGGGTTGGAAGAATATCTAGAAAAAGTGTGCTCAATACGAGTCATTGGTGAGAGTGACATCATGCAGGAATTCCTATCAGAATCAGATGAGAACTACAATGGTGTGTCTGACGTAGAGCTGAGAGTAGCATTACCAGATGGAACAACAGTTACAGTCAGGGTTAAAAAGAACAGTACTACAGACCAAGTATATCAGGCTATTGCAGCAAAGGTTGGCATGGACAGTACGACAGTGAATTACTTTGCCTTATTTGAAGTGATCGATCATTCCTTTGTACGTAAGCTGGCACCTAATGAATTTCCTCATAAACTCTACGTCCAGAATTACACATCAGCTGTGCCAGGCACCTGCCTGACCATTCGAAAGTGGCTTTTTACGACAGAAGAAGAAATCCTCTTAAATGACAATGACCTTGCTGTTACCTACTTCTTTCATCAGGCTGTTGATGATGTGAAAAAAGGTTACATCAAAGCAGAGGAAAAATCCTACCAATTACAGAAGCTGTATGAACAAAGGAAAATG

Related Sequences

bmy_18552T0 Protein

Length: 225 aa      
>bmy_18552T0
MAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRVKKNSTTDQVYQAIAAKVGMDSTTVNYFALFEVIDHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIRKWLFTTEEEILLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKM