Sequence detailsbmy_18552 (Coding sequence)

Part of scaffold_1807 (SequenceType object (1))

For more information consult the page for scaffold_1807 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNX27ENSTTRG00000011477 (Bottlenosed dolphin)

Gene Details

sorting nexin family member 27

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010883, Bottlenosed dolphin)

Protein Percentage 99.56%
cDNA percentage 99.26%
Ka/Ks Ratio 0.14818 (Ka = 0.0024, Ks = 0.0162)

Additional orthologs identified in other species via the OPTIC pipeline.

SNX27 (Cow)   SNX27 (Human)   Snx27 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 675 bp    Location:420463..403150   Strand:-
Raw sequence 
>bmy_18552
ATGGCAGGGAGGCAGTTGTGTTCTAAGCGGTACCGGGAGTTTGCCATCCTACACCAGAACCTGAAGAGAGAGTTTGCCAACTTTACATTTCCCCGACTTCCAGGGAAGTGGCCATTCTCTTTATCAGAACAGCAATTAGATGCCCGACGTCGGGGGTTGGAAGAATATCTAGAAAAAGTGTGCTCAATACGAGTCATTGGTGAGAGTGACATCATGCAGGAATTCCTATCAGAATCAGATGAGAACTACAATGGTGTGTCTGACGTAGAGCTGAGAGTAGCATTACCAGATGGAACAACAGTTACAGTCAGGGTTAAAAAGAACAGTACTACAGACCAAGTATATCAGGCTATTGCAGCAAAGGTTGGCATGGACAGTACGACAGTGAATTACTTTGCCTTATTTGAAGTGATCGATCATTCCTTTGTACGTAAGCTGGCACCTAATGAATTTCCTCATAAACTCTACGTCCAGAATTACACATCAGCTGTGCCAGGCACCTGCCTGACCATTCGAAAGTGGCTTTTTACGACAGAAGAAGAAATCCTCTTAAATGACAATGACCTTGCTGTTACCTACTTCTTTCATCAGGCTGTTGATGATGTGAAAAAAGGTTACATCAAAGCAGAGGAAAAATCCTACCAATTACAGAAGCTGTATGAACAAAGGAAAATG

Related Sequences

bmy_18552T0 SequenceType object (3)

Length: 225 aa      
>bmy_18552T0
MAGRQLCSKRYREFAILHQNLKREFANFTFPRLPGKWPFSLSEQQLDARRRGLEEYLEKVCSIRVIGESDIMQEFLSESDENYNGVSDVELRVALPDGTTVTVRVKKNSTTDQVYQAIAAKVGMDSTTVNYFALFEVIDHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLTIRKWLFTTEEEILLNDNDLAVTYFFHQAVDDVKKGYIKAEEKSYQLQKLYEQRKM