Part of scaffold_1798 (Scaffold)

For more information consult the page for scaffold_1798 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AP1M1 ENSTTRG00000000844 (Bottlenosed dolphin)

Gene Details

adaptor-related protein complex 1, mu 1 subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000796, Bottlenosed dolphin)

Protein Percentage 99.05%
cDNA percentage 98.57%
Ka/Ks Ratio 0.06893 (Ka = 0.0048, Ks = 0.0698)

AP1M1 ENSBTAG00000013329 (Cow)

Gene Details

AP-1 complex subunit mu-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017724, Cow)

Protein Percentage 100.0%
cDNA percentage 94.96%
Ka/Ks Ratio 0.001 (Ka = 0.0004, Ks = 0.442)

AP1M1  (Minke Whale)

Gene Details

adaptor-related protein complex 1, mu 1 subunit

External Links

Gene match (Identifier: BACU010317, Minke Whale)

Protein Percentage 99.76%
cDNA percentage 99.05%
Ka/Ks Ratio 0.01659 (Ka = 0.001, Ks = 0.0575)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1398 bp    Location:131740..162029   Strand:+
>bmy_18564
GCGCGCGGCTCCCTGGACCGGAAGTGGAAAAGAACTGTCGCGGGGCGCGCCCGGCCTGGCTCACCGCTTGGCAGTTCCCGCTGTCGCCGCCGCCCTCGGCCAGTGCCGAGGCTTTCCGCAGCCGCCATGTCCGCCAGTGCCGTCTACGTGCTGGACCTGAAGGGCAAGGTGCTCATCTGCCGGAACTACCGCGGCGACGTGGACATGTCGGAGGTGGAGCACTTCATGCCCATCCTGATGGAGAAAGAGGAGGAGGGGATGCTGTCACCTATCCTGGCCCATGGGGGAGTCCGCTTCATGTGGATCAAACACAACAACCTGTATCTGGTCGCCACCTCTAAGAAGAACGCGTGCGTGTCACTGGTGTTCTCCTTCCTCTACAAGGTGGTGCAGGTATTTTCGGAATATTTCAAGGAGCTGGAAGAGGAGAGTATCCGCGACAACTTCGTCATCATCTACGAGCTGCTGGATGAGCTCATGGACTTCGGCTACCCCCAGACCACAGACAGCAAGATCCTGCAGGAGTATATAACTCAGGAAGGCCACAAGTTGGAAACAGGGGCCCCACGGCCCCCAGCCACCGTCACCAACGCAGTGTCCTGGCGCTCTGAGGGCATCAAGTACCGGAAGAACGAGGTGTTCTTGGACGTCATTGAGTCCGTCAATCTCCTGGTCAGCGCCAACGGTAACGTCCTACGCAGTGAGATTGTGGGCTCCATCAAGATGCGGGTCTTCCTGTCGGGCATGCCTGAGCTGCGCCTGGGCCTCAACGACAAGGTTCTCTTCGACAACACGGGCCGTGGCAAAAGCAAGTCCGTGGAGCTGGAGGACGTGAAGTTCCACCAGTGTGTGCGGCTCTCTCGCTTTGAGAACGACCGCACCATCTCCTTCATCCCACCTGATGGCGAGTTCGAGCTCATGTCCTACCGCCTCAACACCCATGTCAAGCCCTTGATCTGGATCGAGTCCGTGATTGAAAAGCATTCCCACAGCCGCATCGAGTACATGATCAAGGCCAAGAGCCAGTTCAAGCGGCGGTCAACAGCCAACAACGTGGAGATCCACATCCCCGTGCCCAACGATGCCGACTCACCCAAGTTCAAGACGACAGTGGGGAGCGTCAAGTGGGTCCCCGAGAACAGTGAGATTGTGTGGTCCATCAAGTCCTTCCCGGGCGGCAAGGAGTACCTGATGCGGGCCCACTTCGGCCTGCCCAGCGTGGAGGCAGAGGACAAGGAGGGCAAGCCCCCGATCAGTGTCAAGTTTGAGATCCCCTACTTCACTACCTCCGGCATCCAGGTGCGCTACCTGAAGATCATCGAGAAGAGCGGCTACCAGGCCTTGCCGTGGGTTCGGTACATCACTCAGAACGGAGATTACCAGCTCCGGACCCAGTGA

Related Sequences

bmy_18564T0 Protein

Length: 466 aa      View alignments
>bmy_18564T0
ARGSLDRKWKRTVAGRARPGSPLGSSRCRRRPRPVPRLSAAAMSASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFLDVIESVNLLVSANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKHSHSRIEYMIKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRTQ*