Part of scaffold_1812 (Scaffold)

For more information consult the page for scaffold_1812 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RDX ENSTTRG00000005182 (Bottlenosed dolphin)

Gene Details

radixin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004900, Bottlenosed dolphin)

Protein Percentage 73.25%
cDNA percentage 73.32%
Ka/Ks Ratio 0.13892 (Ka = 0.0025, Ks = 0.0178)

RDX ENSBTAG00000004672 (Cow)

Gene Details

radixin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006129, Cow)

Protein Percentage 98.73%
cDNA percentage 96.25%
Ka/Ks Ratio 0.03831 (Ka = 0.0058, Ks = 0.1518)

RDX  (Minke Whale)

Gene Details

radixin

External Links

Gene match (Identifier: BACU004580, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.43%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.016)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1416 bp    Location:202208..148965   Strand:-
>bmy_18577
ATGCCGAAACCAATCAATGTAAGAGTAACAACAATGGATGCTGAGCTGGAATTTGCCATTCAGCCCAACACAACTGGCAAACAGCTTTTTGACCAGGTGGTGAAAACGGTTGGTTTGCGTGAAGTCTGGTTTTTTGGGCTGCAGTATGTGGACAGCAAGGGCTATTCTACGTGGCTTAAACTAAATAAAAAGGTGACACAGCAAGATGTTAAAAAAGAGAATCCTCTGCAGTTCAAATTTAGAGCTAAATTCTTTCCTGAAGATGTTTCTGAGGAATTAATTCAAGAAATAACCCAGAGACTTTTCTTCTTGCAAGTTAAAGAAGCTATCTTAAATGATGAGATATATTGTCCACCAGAAACTGCAGTTCTTTTGGCTTCCTATGCTGTCCAAGCCAAGTATGGAGATTTTAATAAAGAGATTCATAAGCCAGGCTACCTGGCTAATGATAGACTCCTACCCCAGCGTGTTTTGGAACAACACAAACTGACAAAAGAACAGTGGGAAGAAAGAATACAGAACTGGCATGAAGAACATAGAGGAATGCTAAGGGAAGATTCTATGATGGAATACCTGAAGATTGCACAGGATCTAGAAATGTATGGAGTCAACTATTTTGAAATAAAAAATAAAAAGGGAACTGAATTGTGGCTAGGCGTTGATGCTTTGGGTCTGAATATTTATGAACATGATGACAAGTTAACACCTAAAATTGGTTTTCCCTGGAGTGAAATCAGAAATATTTCATTTAATGACAAAAAATTTGTTATAAAGCCGATTGACAAAAAGGCACCTGATTTTGTTTTTTATGCACCTCGTCTGAGAATCAATAAGCGGATTTTGGCCTTATGCATGGGAAACCATGAACTATACATGCGAAGAAGGAAGCCTGATACTATTGAGGTGCAACAGATGAAGGCTCAGGCGAGGGAGGAGAAGCATCAGAAGCAGTTGGAAAGGGCGCAATTAGAGAATGAAAAGAAGAAAAGAGAAATAGCAGAAAAGGAAAAGGAAAGAATAGAACGTGAAAAGGAAGAGCTAATGGAACGTCTGAGGCAAATTGAAGAACAGACAATGAAAGCCCAGAAAGAACTAGAAGAACAGACTCGAAAAGCTCTAGAACTGGACCAGGAACGAAAACGAGCAAAAGAAGAAGCAGAAAGGCTTGAAAAGGAGCGTCGAGCTGCTGAAGAGGCCAAATCTGCTATAGCAAAACAGGCTGCCGACCAGATGAAGAATCAGGAGCAGCTGGCATTAAGTTCAGAATTAGCCCAAGCCAGAGATGAAACCAAGAAAACACAAAATGATGTTCTTCATGCTGAGAATGTTAAAGCAGGCCGTGATAAGTACAAGACTCTGCGACAGATTCGGCAAGGCAATACAAAGCAACGTATTGATGAGTTTGAAGCAATGTGA

Related Sequences

bmy_18577T0 Protein

Length: 472 aa      View alignments
>bmy_18577T0
MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLKLNKKVTQQDVKKENPLQFKFRAKFFPEDVSEELIQEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQAKYGDFNKEIHKPGYLANDRLLPQRVLEQHKLTKEQWEERIQNWHEEHRGMLREDSMMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEHDDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLERAQLENEKKKREIAEKEKERIEREKEELMERLRQIEEQTMKAQKELEEQTRKALELDQERKRAKEEAERLEKERRAAEEAKSAIAKQAADQMKNQEQLALSSELAQARDETKKTQNDVLHAENVKAGRDKYKTLRQIRQGNTKQRIDEFEAM*