Part of scaffold_1806 (Scaffold)

For more information consult the page for scaffold_1806 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SYTL2 ENSTTRG00000012013 (Bottlenosed dolphin)

Gene Details

synaptotagmin-like 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011392, Bottlenosed dolphin)

Protein Percentage 85.2%
cDNA percentage 88.38%
Ka/Ks Ratio 0.6342 (Ka = 0.0511, Ks = 0.0806)

BT.43006 ENSBTAG00000000460 (Cow)

Gene Details

synaptotagmin-like protein 2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000030362, Cow)

Protein Percentage 58.85%
cDNA percentage 67.23%
Ka/Ks Ratio 0.50376 (Ka = 0.3821, Ks = 0.7585)

SYTL2  (Minke Whale)

Gene Details

synaptotagmin-like 2

External Links

Gene match (Identifier: BACU002283, Minke Whale)

Protein Percentage 95.98%
cDNA percentage 97.6%
Ka/Ks Ratio 0.57745 (Ka = 0.0206, Ks = 0.0357)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 5400 bp    Location:315496..371196   Strand:+
>bmy_18594
ATGATCGACTTAAGCTTCCTGACGGAGGAGGAGCAAGAGGCCATCATGAAGGTTCTGCAGCGGGATGCTGCCCTGAAGAGGGCTGAAGAGGAGAGAGTCAGACATTTGCCTGAAAAAATTAAGGATGACCAGCAGCTGAAGAATATGAGTGGTCAGTGGTTTTATGAAGCCAAGGCAAAAAGGCACAGAGACAAAATCCACGCAGCAGATATCATCAGAGCATCCATGAGAAAGAAGAGGCACCAGGGAGCAGCTGAGCAGAGTAAGGACAGAGCAAACAGGACAAAGGAAAGCTGGGTGAATAATGTCAACAAAGATGCTTTCCTCCCCCCAGAGCTAACCGGTGTTGTAGAAGAGCCAGAAGAAGACGTAGCGCCTGCAAGCCCAAGTTCCAGTGTGGTAAATCCAGCTTCCACCATGATTGATACATCCCAGGAAAGCACAAGGAAGTCAGCTGTATCTCCAGCCAAGCAAAGGAAGAATCCGTTTAATAGCTCCATGCTGCCAGAAGATCACTTATCTCAACAAATCAAAAACGAGCAGTCAAAAAATGGAAGGGCTGGTTTCTTTCGGACTTCAAAAGAGGGTGAATTGTCAGAGTCCAAAGAAAAGTCATCTATCCTGGATATTTCAAGCCAAAAGTTAGAGAAAACAAAGCAGACTTTTCCAGGCCCTGAGAATGGGTCCCAAATCAAGGCTCCAATCCCCAAAGCCAGGAAAATGATCTATAAATCGCATGACTTAAAGCAAGATGATGACCAGTCTTTTCCTAGACAAAGGACAGACTCCCTGAACACAAGAGGGGCTCCAAGAGGGATCCTGAAACGCAATTCCAGTTCCAGTAGCACAGACTCAGAAACTGTTCGTTTTCATCAGAACATTGAACCCAAAAGCAAAATTGTGTCACCTGGCCTAACCATCCATGAGAGAATTTCTGAGAAGGAGCATTCTTTAGAAGATGACTCCTCCTCAAACTCACTGGAGCCATTAAAGCACGTGAGATTCTCTGCAGTGAAGGATGAACTCCCACAGAGTCTGGGGCTAGTCCATGGCCGGGAAGTAGGAGAATTTAGTGTTTTAGAATCTGACAGGTTGAAGAATGGAACAGAAGATGCAGGGGACATAGATGAGTTTTGCAATGATCCTAAGCCTTCCCAATACAGAAAGCCTTTGCCTTCTCAGCCATCAGCCTCAAGCCCGAGTACATCAAAAAATGAAACACATCAGCCAACGACTTCTGGTTCCTTTCCAATTAATGAGCACCATTCTCCCAAAGAAATTTTAACTACAAGAGCACAGTCCACTGAGAATTCACACACCATCAATGAACACAAAGCTAACTCATCAGAATTGTCAAGGCTTGAATCAAAATTGTCCAGAAGCCCTGCTGAAAAGCATTTCTATGTTGCAGATGAACTGTCTCACGTTGAGCCTGAGTCATCTCAGGTGCCAGATCGCAGTTCTAGAGACCATCAGCAAGGTAAGCCCCCTCTTCTCAAGTCCCTAAAAGCTAAGACGTCCTCATGCTCTGGTCCACATGCCACTGAGATAAGGAAGACAACCGATGATTCCATATCTAAAGTCCTAGACTGGTTGAACCGAAGTTCTCATTCGGATGACAAGAAATCATCTCTCCAATATTCCCAAGAAATAGAGCCCAAAGAAAAAACAGACTCAAAGTCACGGATTGCTGTTGGCTTGGTGACAGATGATACCAGTCAAAAAGAAAATGGCTCAAAGGCTCTGTTATCCACCAAAGTTGAATTGACACCTGTGGGATCTGATTCAACGTTCCAGGTAGAGGAAAATATGCCTTTTGGAAATGGCGAAAATGTGAATATCAAACCCAAATCTATTAATTTGTCCTCACAAGGCAAGGAAAGTCCAGGCATACTGCAACCATTTGAAATCTCCAGTCCAAATCAAGAGAGTAAAACTGTGGACTATAGCCAAGGTTCAAAAAACGTAGGAGAAGGAATTGGGGTACTTCCTCCAACCAATAACTATTCCTACAGTGTTTGCAAAGGATCTCATGCAGAAGATCAAGTTCCATGCAACATTAAGGATGTTGACAGTTTAGGTGAAGAAGAGCCCAAGCTTTGTGTTTATGAAAAAAATAGAAGAAAGTCAGAAGTGAATTTTGACTCTTCAACAATTATCAAACAACGGAGTTTTAAAGACGATGTGAAGGCAGAGAGAGAGAGCAAAGGAAGAGATAGTTACATCCTAAAAGCTTCTTCAGAATCAGAGACTATTGAGTCACCCCCTGAGGCTACCAACAATAAATCTCCTTGGAAGAAGCCTAAGGTCCAACTACAAGAAGCAGGTGAGGTTCCCCAGAAGCAAGTGCAAAGAGAGAAATACAAAAGAGTGAGTGACAGAATATCCTTTTGGGAAGGTGAGAAAGCTGCTACTAACTTAACTCATAAAGAACCGACATCTTCATTTAGTCAGGAACGAATTTCTGCTAAAGCATATCAGCCTGTGAAGTCCATGGACAGTTTATCTACGGGCTGTAGTAAATATAATAATCAAGTCACTGCCAAACAAGTGGTCCTAGATAAGGATGGTCAAGCAGCCCATCTCTGCCATTTTTATTCCTCACATAAAACTAAAGAGACCAGGCCCCAAATATCAGGTCCATCCAAAAATGATCCTTCAGCTGACCAACCAGGTAAAGTGTCTCTGTTTCAGAATAAGACAACTGAGCCTATAAGATTACCAGTGACAGACAGTTTGCATTATGAAAAGGACATTACTCTGCCACCACTGCAACTTCCTTCAAATGTTGGGAGTGAAATACATACCTCTTTGGAGAAAGACAGATCTCTAATTGGTGAATGGAATCCCAACTTTAAAGTTATATCCCTAAAAGAAAGAATGGATGAACCCAACACAGAACAGGTCTACAATCACTCTCAATTTGAGAATTTGAGAAAGTTTTGGGACTTAGGAGCCAATCCAAACAGTCAAGATAATATTGAGAAGAATACTACCACAAGTCAAAAAAATTCTGTGCCTTTTAATAGCCAGAAACACAAAGAATTCAGTGACATTAAATCATCAGGAAAAAATACCCATGAAAGAGAGATGCTTCTAAGCCAGAAAAAAGTTCCGGCAGGAGAAGAAATAGAGAAATTAAATTCAAAGGGCACACTCCAGGTGTTACCAAATGAAACCACATTTCCATTGAGACCACCCAGAAAGTTCACTCATCAGTTGCCAGGATATGAGTCATCAAAGGAAAACATGGGAAAAAATACAGAAGGGTTTGTTACTCCAGTGTTCAAGGAAGAAAAGGATTACTCTGACCGAGAGATTCAAGAGATTCAAGAATCCATYGTGAAAACAAGTGTTTTGTCTAAAGACTACAGAGACACATTTAATGACAGCTTACAGAAGCTGCTTTCAGAAGCCTCATCACCAGTCATCCAGCCCTCTGGTGGAAAAGTTCATAAAAAACAAGCACTTGAACCAGGTATTTCTGAAAATAGGACATGGCCTCGAAAGACAGATTTTGCTGATACTGAGGAAGAAGCCAAAAGACCTAAGGAGATCATTAATGAGCATATAGACAAAACAGTAGCTCCTCCAAAGGTGAATTCGAACACTTTGACTGCTAGTCTAGACAAACTCCTGAAGGAAGCAACTGGAACTCCACTCTCTCCCTTGCAAACCAAATGTGAACCGGCAACCACTGGGATCAACTCTGAGTCTGAAGAGAGTAGAGTTTATGAAAAAGGGATAGAATGGAGTCAGAACACATCAGCCTATCAGAGAGAGATAATAGCTTCTTTTCCAGAGGCAGAAACTTTGGGAAATACAGCTCTCTCCCAGAAAGCTCAAAGTGGTGAGTGCCAGCTAAACACGGAGAACTTGTTTCAGATGGCTGCAGAAGGTTCTTACCCATTGGATCAGCCTTCCTATCACCACAGAAAGGGTTCTTTTGGGGATGTGGCCAACACTYCCCAAGATATGCCTTCTTCTAAGGATGCCCATCTTGCTCCTCAGAATAAGGCACTACCTTCTCAAAGGGAAATTTCTGAGACTGTAGAAAAAGTTCTTCTTCCATCCAAACCTGCACTGAATGATGTAAAGGCTGTATTACAAAAGCTACTTAGAGAAGCTTGGTTGAGTTATCCAGTTGGGAGGGAAGTAGTTTCTGGAGAAGTAAAAGCAGAATTTCCTGAAGGTGCACAGGTAGAAGGTAGCCCCTCAAATTCTCTGGGAGTTATCCCATCACAGACTACAATGGACAGCCTAGTTCCAGACAGAAAAGATTTGTATTCCTTCAGTGTAGTTCCTGATAAAACTCATAAAGTTGGATCTTATTTAGCTGCCCAAATGCCTCCATCAGAACAAACCCTTAGCTCCTCTGCATCTACTGTTGCTGAGTATGGCAAAGAGTTATCTCAGGAAGTGACAGAAATTGTGAGGGAAACAATTATTCAGCCTAAATCAGAGCTCCTTGAATTCAGCGCTGTCTTAGAAAAACTACTGAAGGAAACAATTGAAACCCCCTGCTCAAAATATGACAGTGATACAGGGACTCTTTATTCATCAAAGTTAATAGGTAGTACTGAGGTGCCCAGGCAAGCTGCTTCTGAATTCCATCCTAAGGAAATAAAAGAAACAGTAGAAAAGCCTGAGGCTCCATCAATTACTGGGAGTGCTTTTGAGATTGGCTTTGAGAAACTCCTTAAAGAATCATCTAACGGTCCTTCTTATCAGCTCCAAGTGTCAGTGAAGGAAGAAACTCCTGAGAAGGAGCCTTCACAGTCAAAGCAGGCCAGGTTCTTGGGGAAAGTGCCCTCTTTTTACTGCACAGCCTCAAAGGCCTCAGAAATGAAACTTAAGAGTAATGTTTTCAAATCTCAAGTCAGTCAACGTGATAAAGTGTTGGGAAGAGACAAAGCTGTGACTGACTTACCAATAGATCTCTGTGGTTTTGAAAGTGGGGTTGAGATCCCTGGAACCTCACAACTTTCTGTGGACCATGAAATAGGGACCACTGAAACTATAAAACCCCCAGAGGACAGGAATTATGAAAGTGAGGTTGCAGTAGTTCGAGAAGGGGCTTTTCAGGAGCTTGGTTTCAAAGAGGCTCCTGAAGCAATTAACGTGCCCAGAAGTTCAGAAGAAGAACCCAGTCCTGTTTTGAAAACTTTGGAAAGGAGTGCTGCTAGGAAAATGCCTTCCAAAAGTCTAGAAGATATTGCATCAGATTCATCAAATCAAGCAAAAGTAGATAATCTGCCAGAAGAATTAGTGCGTAGTGCTGAAGATGATCAAAAAGCAGATCAGGAACCAGATACAAATGAATGCATTCCAGGAAGCTATAGACATGAAGCAATTTATAATGTATCTGGACCTAAGAAAGGACTGTACTTTGACAATTAA

Related Sequences

bmy_18594T0 Protein

Length: 1800 aa      View alignments
>bmy_18594T0
MIDLSFLTEEEQEAIMKVLQRDAALKRAEEERVRHLPEKIKDDQQLKNMSGQWFYEAKAKRHRDKIHAADIIRASMRKKRHQGAAEQSKDRANRTKESWVNNVNKDAFLPPELTGVVEEPEEDVAPASPSSSVVNPASTMIDTSQESTRKSAVSPAKQRKNPFNSSMLPEDHLSQQIKNEQSKNGRAGFFRTSKEGELSESKEKSSILDISSQKLEKTKQTFPGPENGSQIKAPIPKARKMIYKSHDLKQDDDQSFPRQRTDSLNTRGAPRGILKRNSSSSSTDSETVRFHQNIEPKSKIVSPGLTIHERISEKEHSLEDDSSSNSLEPLKHVRFSAVKDELPQSLGLVHGREVGEFSVLESDRLKNGTEDAGDIDEFCNDPKPSQYRKPLPSQPSASSPSTSKNETHQPTTSGSFPINEHHSPKEILTTRAQSTENSHTINEHKANSSELSRLESKLSRSPAEKHFYVADELSHVEPESSQVPDRSSRDHQQGKPPLLKSLKAKTSSCSGPHATEIRKTTDDSISKVLDWLNRSSHSDDKKSSLQYSQEIEPKEKTDSKSRIAVGLVTDDTSQKENGSKALLSTKVELTPVGSDSTFQVEENMPFGNGENVNIKPKSINLSSQGKESPGILQPFEISSPNQESKTVDYSQGSKNVGEGIGVLPPTNNYSYSVCKGSHAEDQVPCNIKDVDSLGEEEPKLCVYEKNRRKSEVNFDSSTIIKQRSFKDDVKAERESKGRDSYILKASSESETIESPPEATNNKSPWKKPKVQLQEAGEVPQKQVQREKYKRVSDRISFWEGEKAATNLTHKEPTSSFSQERISAKAYQPVKSMDSLSTGCSKYNNQVTAKQVVLDKDGQAAHLCHFYSSHKTKETRPQISGPSKNDPSADQPGKVSLFQNKTTEPIRLPVTDSLHYEKDITLPPLQLPSNVGSEIHTSLEKDRSLIGEWNPNFKVISLKERMDEPNTEQVYNHSQFENLRKFWDLGANPNSQDNIEKNTTTSQKNSVPFNSQKHKEFSDIKSSGKNTHEREMLLSQKKVPAGEEIEKLNSKGTLQVLPNETTFPLRPPRKFTHQLPGYESSKENMGKNTEGFVTPVFKEEKDYSDREIQEIQESIVKTSVLSKDYRDTFNDSLQKLLSEASSPVIQPSGGKVHKKQALEPGISENRTWPRKTDFADTEEEAKRPKEIINEHIDKTVAPPKVNSNTLTASLDKLLKEATGTPLSPLQTKCEPATTGINSESEESRVYEKGIEWSQNTSAYQREIIASFPEAETLGNTALSQKAQSGECQLNTENLFQMAAEGSYPLDQPSYHHRKGSFGDVANTXQDMPSSKDAHLAPQNKALPSQREISETVEKVLLPSKPALNDVKAVLQKLLREAWLSYPVGREVVSGEVKAEFPEGAQVEGSPSNSLGVIPSQTTMDSLVPDRKDLYSFSVVPDKTHKVGSYLAAQMPPSEQTLSSSASTVAEYGKELSQEVTEIVRETIIQPKSELLEFSAVLEKLLKETIETPCSKYDSDTGTLYSSKLIGSTEVPRQAASEFHPKEIKETVEKPEAPSITGSAFEIGFEKLLKESSNGPSYQLQVSVKEETPEKEPSQSKQARFLGKVPSFYCTASKASEMKLKSNVFKSQVSQRDKVLGRDKAVTDLPIDLCGFESGVEIPGTSQLSVDHEIGTTETIKPPEDRNYESEVAVVREGAFQELGFKEAPEAINVPRSSEEEPSPVLKTLERSAARKMPSKSLEDIASDSSNQAKVDNLPEELVRSAEDDQKADQEPDTNECIPGSYRHEAIYNVSGPKKGLYFDN*