Sequence detailsbmy_18595 (Coding sequence)

Part of scaffold_1806 (SequenceType object (1))

For more information consult the page for scaffold_1806 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC89ENSTTRG00000012011 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 89

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011390, Bottlenosed dolphin)

Protein Percentage 95.58%
cDNA percentage 97.24%
Ka/Ks Ratio 0.27466 (Ka = 0.0184, Ks = 0.0669)

CCDC89ENSBTAG00000000457 (Cow)

Gene Details

Coiled-coil domain-containing protein 89

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000000582, Cow)

Protein Percentage 83.66%
cDNA percentage 88.37%
Ka/Ks Ratio 0.18352 (Ka = 0.0792, Ks = 0.4315)

CCDC89 (Minke Whale)

Gene Details

coiled-coil domain containing 89

External Links

Gene match (Identifier: BACU002284, Minke Whale)

Protein Percentage 98.34%
cDNA percentage 98.43%
Ka/Ks Ratio 0.16946 (Ka = 0.0071, Ks = 0.0419)

Additional orthologs identified in other species via the OPTIC pipeline.

CCDC89 (Human)   Ccdc89 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1089 bp    Location:379136..380224   Strand:+
Raw sequence 
>bmy_18595
ATGGACACCCCACCCTCTGAAGAACCCTTAGATAAGCAAAACAAAAAACTAGAAAACCAGGAAGAGGAGATGGAGTTTAAGGAACTGGATGGTCTGAGGGAAGCCTTGGCAAACCTCCGGGGACTGTCCGAGGAGGAGAAGAGTGAGAAGGCGATGCTGTACTCCCGCATCCARGAGCAGTCCCAGCTCATCTGCATCCTGAAGCGGAGGTCGGACGAGGCCCTGGAGCGCTGCCAGATCCTGGAGCTGCTCAACACAGAGCTGGAGGAGAAGAGGATGCAGGAGGCTGAGAAGCTGAAGGCCAAGAGCCAGCAGGCCCAGAGGCTGGAGGAACGCTTTATGACCCTGGCAGCCAACCATGAGTTGATGATCCGCTTCAAGGATGAACACAAAAGTCAGAACATCAAGCTGAGCGAGGAGAATGAGAAGCTGAGGATGGAGAATGACCACCTCTTCAGCCAGGCTCTGAAGGACCAGGAGGCCAAAGTATTGCAGCTCACTGCCCGGAGTGAGGCCCTCACCCAGGAGCTGGAGTCTCTGAAGCAGAGGAGCGCTCAGGAGGCCTGCCAGGCCCAGGCCCGAGAGAAGGAACTGCTGGAGCTGTGCCAGAGCCAGCAGGCCTGCGCCCACTCCAAGGACACAGAGCAGCTGCGCAGCCAGCTGCAGAGCCTCAAGCAGCAGCACCAGCAGGCCATGGAGCGGATGGCCAAGGCCGAGCAGGCACACAGCCAGCTGAACCGGGAGCTGCAGGCCAGGCTGCAGACCGTCACCTGTGAGAAAGACGAGCTGGTGCAGCTGTCCATGGAGAGGGGCAAGGTGCTTCAGAACAAGCAAGCGGAGATCCGCCAGCTTGAGGAGAAGTTGGAGACGGCCGATGTGGCCAGGAGGCATGCGCTGGAGCGGTTTGAACAAGAGGCAGTGGCCGTGGACAGTAATTTGAGAGTCCGGGAACTCCAGCGCAGGGTAGACGGGATCCAGAAGGCCTACGATGAACTCAGGCTGCAGTCCGAAGCCTTCAAAAAGCACAGCCTGGATCTTTTAAGCAAGGAGAGAGAACTCAACGCCAAACTCCGCCATCTCTTTCCRTAA

Related Sequences

bmy_18595T0 SequenceType object (3)

Length: 363 aa      View alignments
>bmy_18595T0
MDTPPSEEPLDKQNKKLENQEEEMEFKELDGLREALANLRGLSEEEKSEKAMLYSRIQEQSQLICILKRRSDEALERCQILELLNTELEEKRMQEAEKLKAKSQQAQRLEERFMTLAANHELMIRFKDEHKSQNIKLSEENEKLRMENDHLFSQALKDQEAKVLQLTARSEALTQELESLKQRSAQEACQAQAREKELLELCQSQQACAHSKDTEQLRSQLQSLKQQHQQAMERMAKAEQAHSQLNRELQARLQTVTCEKDELVQLSMERGKVLQNKQAEIRQLEEKLETADVARRHALERFEQEAVAVDSNLRVRELQRRVDGIQKAYDELRLQSEAFKKHSLDLLSKERELNAKLRHLFP*