Part of scaffold_1828 (Scaffold)

For more information consult the page for scaffold_1828 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PUS7L ENSTTRG00000010169 (Bottlenosed dolphin)

Gene Details

pseudouridylate synthase 7 homolog (S. cerevisiae)-like

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009644, Bottlenosed dolphin)

Protein Percentage 95.48%
cDNA percentage 97.46%
Ka/Ks Ratio 0.4019 (Ka = 0.0182, Ks = 0.0452)

PUS7L ENSBTAG00000004718 (Cow)

Gene Details

pseudouridylate synthase 7 homolog-like protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042966, Cow)

Protein Percentage 89.72%
cDNA percentage 91.9%
Ka/Ks Ratio 0.21685 (Ka = 0.0488, Ks = 0.2251)

PUS7L  (Minke Whale)

Gene Details

pseudouridylate synthase 7 homolog (S. cerevisiae)-like

External Links

Gene match (Identifier: BACU002222, Minke Whale)

Protein Percentage 96.47%
cDNA percentage 97.86%
Ka/Ks Ratio 0.3617 (Ka = 0.014, Ks = 0.0388)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1929 bp    Location:392344..364017   Strand:-
>bmy_18601
ATGGAAGAGGATACAGATTTTAGAATCAGGTTTAGTTCTTTGTGTTTCATTACGGATCACGTTGGATTTCATGGCACCATAAAAAGCTCACCAAGTGACTTTGTTGTTATTGAGATTGATGAAMAGGGACAGTTAGTTAATAAAGCCAGTGATGAAGCTATTTACAAGGTTAATAAAATACTACCTGGGCCAAATAATTTGGCTAAAAAAACAAAACTAGATCCTCAAAATTTATCCTTTGAAGAGAGAAGCAATCAAGAAGTCAGTACTTTGGCTGGGTGCTCTGGTGATGACCAAAATTATGAGCCTGGTTCAGAAAAGGAAGATACTATCAAAGATGGAACTTCCAAAGGTGAAGAAGAAAACATTGATGTATTAGGATCCTTGTTAGATGAAAAAACTTACGAATTACTGAATCAGTTTGCCTGTGATATAAAAGAGAAGTGGAATTCTAAAACTGAACTAATTGGACCATCTCCTGAATTCKCATTAGGCAGAATCCTTGACAAAAACCAGAGGGCTATTTTGCATAGTGCTATTAGGCAGAAATTTCCTTTTTTAATAACTGTAGGAAAAAACAGTGAAATTGTTGTAAAACCAAATCTTGAGTATAAAGAACTCTGTCACTTGGTATCTGAAGAAGAAGCATTTGACTTTTTTAAATATTTGGATGCAAAGAAAGAAAATTCCAAATTTACCTTTAAACCTGATATAAACAAAGATCACAGAAAGGCTGTCCACCATTTTATCAACAAAAAGTTTGGAAATCTTGTGGAAACCAAATCTTTTCCTGAACCGAATTATAGTGCTGATAATCCAAATGTAGTGATAACAGTAAGATTTCGGGAAAAAGCACACAARCACAGGAAAAGATCTCTTCTTGAATGCCAGGAAAGAAAAGTTATGTACACAGCCTTTACCCTTCGAAAAGAAAATCTGGAAATGTTTGAAGCGGTTGGTTTTTTAGCTATCAAACTTGGAGTGATTCCTTCGGATTTTAGTTATGCAGGACTTAAAGACAAGAAAGCCATCACTTATCAAGCAATGGTTGTTAGAAAAGTGACACCAGAGAGGTTGAAAAATGTTGAAAAAGAAATTGAAAAGAAAAGAATGAATGTGTTTAATATTCGGTCTGTAGATGATTCCCTTAGACTCGGTCAGCTCAAAGGAAATCACTTTGATATTGTGAAGGCTGTAAAATTATTTCTTACACCAGAAGATTTGGATGATCCTGTAAATAGAGCAAAGAAATATTTTCTTCAAACTGAGGATGCTAAAGGCACACTTTCACTGATGCCTGAATTCAAAGTTCGGGAGAGAGCATTGTTGGAGTCCTTGCATCGCTTTGGCGTGACARAGGAGGGCTGTATCCAGGCRTGGTTCTCTTTCCCCCACTCCATGCGCATATTCTATGTTCATGCATATAGCAGCAAAATCTGGAATGAGGCAGTATCTTACAGACTTGCAACGTATGGATCAAGAGTGGTGGAGGGTGATTTGGTCTGTTTGGATGAAGATATTGATGATGAGCATTTACCAAGTAGTAAAGTTCATCTAGTAACTGAAGAAGAGGAATCAGCTAATACATATGCAATACATCAGGTGGTTCTTCCAGTGCTTGGATACAGTATTCAGTACCCAAAGAACAAACTAGGGAAGTGGTACCAGGAAGTACTCAGCAGAGATGGACTACAGACATGTAGATTTAAAATACCTACTCTGAAACTGAATGTTCCAGGATGCTATAGAAAGATTTTGAAACATCCCTGTAATCTCTCATACCAACTAATAGAAGACCATGATATTGATGTCATGAAGGAAGGTTCCCACATCGATGAAGCAACTTTATCTCTTGTGATCTCTTTTGATCTTGATGCTTCGTGTTATGCTACAGTTTGTCTGAGGGAAATAATGAAGCATGACTTTTAA

Related Sequences

bmy_18601T0 Protein

Length: 643 aa      View alignments
>bmy_18601T0
MEEDTDFRIRFSSLCFITDHVGFHGTIKSSPSDFVVIEIDEXGQLVNKASDEAIYKVNKILPGPNNLAKKTKLDPQNLSFEERSNQEVSTLAGCSGDDQNYEPGSEKEDTIKDGTSKGEEENIDVLGSLLDEKTYELLNQFACDIKEKWNSKTELIGPSPEFXLGRILDKNQRAILHSAIRQKFPFLITVGKNSEIVVKPNLEYKELCHLVSEEEAFDFFKYLDAKKENSKFTFKPDINKDHRKAVHHFINKKFGNLVETKSFPEPNYSADNPNVVITVRFREKAHKHRKRSLLECQERKVMYTAFTLRKENLEMFEAVGFLAIKLGVIPSDFSYAGLKDKKAITYQAMVVRKVTPERLKNVEKEIEKKRMNVFNIRSVDDSLRLGQLKGNHFDIVKAVKLFLTPEDLDDPVNRAKKYFLQTEDAKGTLSLMPEFKVRERALLESLHRFGVTXEGCIQAWFSFPHSMRIFYVHAYSSKIWNEAVSYRLATYGSRVVEGDLVCLDEDIDDEHLPSSKVHLVTEEEESANTYAIHQVVLPVLGYSIQYPKNKLGKWYQEVLSRDGLQTCRFKIPTLKLNVPGCYRKILKHPCNLSYQLIEDHDIDVMKEGSHIDEATLSLVISFDLDASCYATVCLREIMKHDF*