Part of scaffold_1846 (Scaffold)

For more information consult the page for scaffold_1846 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCARB2 ENSTTRG00000014389 (Bottlenosed dolphin)

Gene Details

scavenger receptor class B, member 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013642, Bottlenosed dolphin)

Protein Percentage 95.94%
cDNA percentage 97.06%
Ka/Ks Ratio 0.40174 (Ka = 0.0225, Ks = 0.0561)

SCARB2 ENSBTAG00000010956 (Cow)

Gene Details

lysosome membrane protein 2 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014549, Cow)

Protein Percentage 92.12%
cDNA percentage 92.28%
Ka/Ks Ratio 0.24025 (Ka = 0.0462, Ks = 0.1923)

SCARB2  (Minke Whale)

Gene Details

scavenger receptor class B, member 2

External Links

Gene match (Identifier: BACU000802, Minke Whale)

Protein Percentage 97.61%
cDNA percentage 97.93%
Ka/Ks Ratio 0.33893 (Ka = 0.0147, Ks = 0.0432)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1269 bp    Location:97633..146398   Strand:+
>bmy_18611
AATATTGTGTTAAGGAATGGCTCGGAGACCTTTGAGTCCTGGAGGAAGCCCCCTCTGCCCGTGCACACCCAGTTCTATTTCTTCAATGTCACCAATCCAGAGGAGGTCCTCAGAGGGGAGACCCCTCGGTTGGAAGAAGTGGGGCCCTACACCTACAGGGAACTCAGAAACAAAGAAGATATTCAATTTGGAGATAATGGAACTACAATATCTGCCGTGAGCAACAAGGCCTATGTTTTTGAACGAGATAAATCTGTTGGAGACCCTAAAATTGACTTACTTAGAACATTAAATATTCCTGCATTGACCGCCATGGAATGGGCCCAGCTACCCTTCCTCCACGAGCTCATCGAGGCCCTGTTGAAGGCCTATCAGCAGAAGCTCTTTGTGACCCACACGGTGGATGAATTGCTCTGGGGCTACAAAGATGAGATCTTATCCCTCATCAACGTTTTCAAACCTGACATCTCTCCCTATTTTGGCCTGTTTTATGGGGAGAAGACCAAAGTTGCTTGGAATTCTAGATCTCTTGTAGAGTCGCTTGACTGGTGGACAGCAGACGAGTGCAATATGATCAACGGAACAGACGGAGATTCTTTTCACCCATTAATCACCAAAGACGAAATCCTTTATGTCTTCCCATCTGATTTTTGCAGGTCAGTATATATAACTTTCAGTGACTTTGAGAGCGTACAGGGACTGCCTGCCTTGAGGTATAAGGTGCCTGCAGAAATATTAGCCAATACCTCAGACAACGCTGGCTTCTGTATACCTAAAGGAAACTGCCTGGGCTCAGGAGTTTTGAATGTCAGCGTCTGCAAGAACGGTGCACCTATTATTATGTCTTTCCCACACTTCTACCAAGCAGATGAGAAGTTTGTTTCTGCCATAGAAGGCATGCACCCAAATAAGGAATATCATGAGACATTTGTGGACATTAATCCTTTGACTGGAATTATCCTAAGAGCAGCCAAGAGGTTCCAAATCAACGTTTATGTCAAAAAATTAGATGACTTTATTGAAACGGGAAATATTAGAACCCTGGTTTTCCCAGTGATGTATATCAATGAGAGTGTTCTCATTGATAAAGAGACTGCAAGTCGACTGAAGTCTGTGATTAACACTACTCTGATCATCACCAACATACCCTACATTATCATGGCGCTGGGTGTGTTCTTTGGTCTGATCTTCACCTGGCTTGCGTGCAGAGGACGGGGATCCATGGATGAGGGAACTGCAGACGAAAGAGCACCCCTCATACGAACCTAA

Related Sequences

bmy_18611T0 Protein

Length: 423 aa      View alignments
>bmy_18611T0
NIVLRNGSETFESWRKPPLPVHTQFYFFNVTNPEEVLRGETPRLEEVGPYTYRELRNKEDIQFGDNGTTISAVSNKAYVFERDKSVGDPKIDLLRTLNIPALTAMEWAQLPFLHELIEALLKAYQQKLFVTHTVDELLWGYKDEILSLINVFKPDISPYFGLFYGEKTKVAWNSRSLVESLDWWTADECNMINGTDGDSFHPLITKDEILYVFPSDFCRSVYITFSDFESVQGLPALRYKVPAEILANTSDNAGFCIPKGNCLGSGVLNVSVCKNGAPIIMSFPHFYQADEKFVSAIEGMHPNKEYHETFVDINPLTGIILRAAKRFQINVYVKKLDDFIETGNIRTLVFPVMYINESVLIDKETASRLKSVINTTLIITNIPYIIMALGVFFGLIFTWLACRGRGSMDEGTADERAPLIRT*