Sequence details bmy_18615 (Coding sequence)

Part of scaffold_1846 (Scaffold)

For more information consult the page for scaffold_1846 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CXCL11 ENSTTRG00000008984 (Bottlenosed dolphin)

Gene Details

chemokine (C-X-C motif) ligand 11

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008519, Bottlenosed dolphin)

Protein Percentage 70.53%
cDNA percentage 81.05%
Ka/Ks Ratio 0.71745 (Ka = 0.2097, Ks = 0.2923)

CXCL11 ENSBTAG00000005603 (Cow)

Gene Details

C-X-C motif chemokine 11

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000034148, Cow)

Protein Percentage 73.0%
cDNA percentage 79.33%
Ka/Ks Ratio 0.31717 (Ka = 0.1822, Ks = 0.5744)

CXCL11  (Minke Whale)

Gene Details

chemokine (C-X-C motif) ligand 11

External Links

Gene match (Identifier: BACU000800, Minke Whale)

Protein Percentage 72.22%
cDNA percentage 80.0%
Ka/Ks Ratio 0.64597 (Ka = 0.2163, Ks = 0.3349)

Additional orthologs identified in other species via the OPTIC pipeline.

CXCL11 (Human)  

Genome Location

Sequence Coding sequence

Length: 411 bp    Location:269231..271119   Strand:+
Raw sequence 
>bmy_18615
ATGATCAGCATTTCTACTCCCTCCAAGAAGAGTATCAAAGCCAAAGCAGCAGCAACAGACAAACATGAATATGAAGGGCATGGCTACAGTCCTGGCTGTGATATTCTGTGCTACAATTGTTCAAGAGATGATAAATTTAATAGAATTTCTTATTTGGCTGCAAAATCTGGCTTCCCCATGTTCARAGGGGGACGRTGTCTTTGCATAGGCCCTGGAGTAAAAGCAGTGAAAGTGGCAGATATTGAGAAAGTCTCCATAATTTACCCAAGTAATAACTGCGACAAAACAGAAGTGATTATCACCCTGAAAACACATAGARGACAAAAATGCCTAAATACCAAGGCAAAGCAAGCAAAAGTTATAATCAAGAAAGTTGAAAGAATGAATTTTTTAAAATATCAAAAAGTATGA

Related Sequences

bmy_18615T0 Protein

Length: 137 aa      View alignments
>bmy_18615T0
MISISTPSKKSIKAKAAATDKHEYEGHGYSPGCDILCYNCSRDDKFNRISYLAAKSGFPMFXGGRCLCIGPGVKAVKVADIEKVSIIYPSNNCDKTEVIITLKTHRXQKCLNTKAKQAKVIIKKVERMNFLKYQKV*