Sequence detailsbmy_18624 (Coding sequence)

Part of scaffold_1809 (SequenceType object (1))

For more information consult the page for scaffold_1809 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DSG3ENSTTRG00000000867 (Bottlenosed dolphin)

Gene Details

desmoglein 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000817, Bottlenosed dolphin)

Protein Percentage 79.94%
cDNA percentage 89.78%
Ka/Ks Ratio 2.02669 (Ka = 0.1324, Ks = 0.0654)

BT.56359ENSBTAG00000039483 (Cow)

Gene Details

desmoglein-3 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000002538, Cow)

Protein Percentage 75.31%
cDNA percentage 83.86%
Ka/Ks Ratio 0.57415 (Ka = 0.159, Ks = 0.277)

Additional orthologs identified in other species via the OPTIC pipeline.

DSG3 (Human)   Dsg3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 4083 bp    Location:190204..237382   Strand:+
Raw sequence 
>bmy_18624
ATCCCGTCTACAGATTGGCGTCTAAGGCAGACCAGGGAGCATAGATGCTGTTGTGTACGATGCAGTGTATCCATTCCACTGGCAGCCACGCCTCATGAATTACCTATAATAATACTGGGACAAGTAAATGGAGCTAGCCTGAATCAGGCCAAGTCTGGTACATTACTCTCCTATAACGGTGCCCATACCCTATTTACACCACCCAACCAAGAATCCTTAGATGGTATTTCAAAATACAAAAATGAAATACCAGTTAAGTCCTTAACCTGTGTTCAGCTTCCAACAGAGGATTTCATTGCTTCAGGAATTGAGACAGCAGAGACTCTGAGAGGGCTTTCCTCAGACGTCGCATGCAGGCGGTTGGAAGGACTAAAGCAGCAGCTCCCTTGGATTCGTTCACCAAGGAAATCAGAGACAATGGCTTGGTTGCTTTTCAGAACCACAGGGGCTCTGACCATTTTAATGGTGGTCCTTTTGGTTCATGGAGAATTGAGAATAGAGACAAGAGGGCAACATGGAGAATATGAGACAGCGGTACAACAAGGCAAAAGGAGATACAAACGTGAATGGGTGAAATTTGCAAGACCCTGCAGAGAAGAAGAAGACAACTCGAAAAGAAATCCAATTGCCACAATTACTTCAGATTTCCAAGCAAACCAGGATATTACCTACCACATTTCTGGAATAGGAATTGATCAGCCCCCTTTTGGAATCTTCATTGTTGACAGAAACACTGGAGGAATTAACATAACAACCATAGTTGATCGTGAGGAAACCCCAAGCTTCCAGATTACCTGTCGTGCTCTCAATGTCCTGGGAGAAGATGTAGAGAAACCGCTTATACTAACAGTCAAAATTTTAGATATAAATGACAATGTTCCAGTGTTCTCAAAAAGTATATTCATGGGTGAAATTGAAGAAAGGAGTGCTTCGAACTCACTGGTGATGACCCTGAATGCCACAGATGCAGATGAACCGAACAACTTGAACTCTAAAATTGCCTTCAAAATTCTCTCTCAGGAACCTGCAGGCACACCCATGTTCCTCCTAAGCAGACACACCGGGGAAGTCCACACTTTGACCAATTCACTTGATCGAGAGCAAGTTAGCAGCTATAATCTGGTTGTGCATGGTGCAGACAGAGATGGAGAAGGACTAGCAACACAATGTGAATGTAACATTAAAGTGAAAGATGTCAACGATAATATCCCAATGTTCAGAAAATTGCAGTATTCAGCAAGTATCAAGGAAAACACTTTAAGTTCTGACTTGCTTCGATTTCAAGTAATAGATTTGGACGAAGAGTTCACAGATAATTGGTTTGCAGTGTATTCCTTTACCTCTGGAAATGATGGGAACTGGTTTGAAATACAAACTGATCCCATAACTAACGAAGGCATCTTGAAGGTGGTTAAGTCTCTAGATTATGAACAACTACAAACTTGGAAACTTAATGTCATCGTCACAAACAAAGCTGAATTTCACAAATCAATAATCTCTCAACATGGAGTCCAGCCAATCCAACTCATAATCCAAGTAATAAATGGAAGGAATTATATTCCGTCCTCCTTTCAAGACATTTATTATCCCAAAAGGCATAAGCAATACACCTTGGGATATAATTATGGTGATTTGCTAATTATTGGTTCAAAAACTGCTCAAATCGAATTTGTCAAAAGCATTAATTGGGCTGCTACTTTCATGGTTAACAAGACAATCACAGCTGAGGTTCTGGCCATTGATGAAATAACAGGTAAAACTTCTACAGGCACCATATGTGTCCAAATACCTGGTTTTAATGAAGATTGTCCAATAATTGTCCTGGAAAAGGAAACAATCTGTAGTTCATCACCTTCCGTGGTTGTCAAAATTATATTAATGGGCAAGGGTGAATATACTGGCCCCTACACATTTTTGCAGAAGGAGAAAACTACAGAACTGTGGGAGATCACAACACTTGATGCCACCTCTGCAATCCTACGAAGCACACAGCAGGTATCTCCCGGTACGTACAGAATCTCCCCGGTCATCACGGACAGCAAGGGCATGTGGTGCGAGACCCCGAAGAGCTTGGTTCTGGAAGTCTGTCAGTGTGACAACAGTGGCACCTGTAGAGTTCCGATCACGACCGAAACCCCTGAGCAGCCTACTGAAGAGAGGCCTGGTAGGCTGGGGTCTGCCGCCATCGGCCTGCTACTCCTCGGTCTTTTGCTGCTGCTGTTGGCCCTCCTTCTGCTGCTGACCTGTTACTGTGGGACCGGTCCTATCGGGGGAGTGACCGGTGGATTCAACCCAGTGCCTGATGGTTCAGAAGGAACAATTCGTCCGTGGGGAATTGAAGGAGCCCAACCTGAAGACAAGGAAATCGCAAATATCTATGTGCCACCTATAATTGCCAATGGAGTTGATTTCACGGAAAATTCTGAAGTTCGTACAAATACATACGCTGGAGGGACGGTGGTGGAAGGAGCTTTGGGAATGGAAGTGACCACCCACCCTGGAGCAGCTGCAGGATCTGGAGCCGCTGCAGAATTCAGAACAGCCGCTGGACTTAGCAACTATTCCACAGGACAGTCCGGAACAATGAGAACAAGGCATTCCATGGAAGGAACCAACATGGACTATGGTGAAGGGGCAATAAACATGAACTTCCTAGACTCCTACCTTTCTCAGAAAGCATTTGCCTGTGCCGAAGAAGATGATGGCCAGGAAGCAAACGATTGCTTGCTGATCTATGATAACGAAGGAATGGGTGCCCCTGGTTCTCCCATCGGCTCCCTGGGTTGTTGCAGTTTTATTGCTGATGAGTTTGATGACAGCTGCTTGGACTCACTCAGTCCCAAATTTAAAAAACTTGCAGAGATAAGCCTTGGGATGGATGATGAAGCCAAAAACTCTCAGCTACCCACCAAAGAGAGCGGTTCTGGGATTGAATCCAGTGGCCAATCCGTACAAGTCCAGCAGTCAGAATCTGTTAGGTACCAGACTTTGTCAGGCAGCCAGGGAGCGTCTGTTTTGTCTGCTTCTGGCTCTGTCCTCCAGCCAGCCATTTCCATCCGTGACCCTTTGCAGCATGGTAGCTATTTGGTAACGGAGACTTGCTCAGCTTCTGGTTCCCACGTGCAGACTTCCACTGCAGTCTTTGATCCACTTCTCACACAAAATGTAATAGTGAGGGAAAGAGTGATTTGTCCCATTTCCAGTGTTCCTGGCAACCTACATGGTCTGGCAGAGCTACAAGGGTCGGGTAGTAAAATCTGTACAGAAGATCCTTGTTCCCTTCTGATGATCTACCTAAAGAAAATATTTTACATTAAGCTCCTCCCTACACACTTCTCAGATCCTGAAATTAAAATCCTCAAAGGATGCCACAAAACAACTCCCTTCAGAACTCAGATCTTGCTTTGGTTGACCCTCCTCATTCTTAAATGCAGACAATTCAAACTGGACCTGGGGAAAATGAAAGCTATGCAGGTAAATTCCAAAAAAATCACCAGTTCCTCTTCTTCACAGAAAGTTGAACGAATAAAAACAGCAAGATCAGTTTCTCTTATCTTTATTTTCAGAAACCAACAATCCAGTGCCAGAAACAACACGTTTTCCACAAAGAACACTGAGATTTCTTCTGCTTTGCCTGATCCAGAGTGCACTACAATTCCCTCCATGACAAGACATAGGCCATTCCAGGTTGGTGTCTTTGCTTTCTTTTTCTTTTATACATGGACTCTTTTTTTCTTTTTTACAAATGCAAAAAAAAAAAAAAAATCTAAGCACAATGCAGTTGTAGTTAAAACTCAAGATAATGATGGCCACAGTGAGCAGTTCTCCTCCACATTTAATAACAGAAACAAGCTACCTGGAAGTCATGGAATCTCTTTTCCGAAGTCAGAGGAAGTATTTATATTCTTTCATAATCAAGAGAAGATTGCAAAGAAGTTTCTTAATTATAAAGCAATACAGAATCAGAGCTTGTCCTGTCTACTCTACTCTGCACTGGAAATTCCTCTGAATACACAAGCAAATAGAGATGAATTCATTCAAATCAAACTATGGCTTATTCATACTTCTAAAGTGAAAATCTGA

Related Sequences

bmy_18624T0 SequenceType object (3)

Length: 1361 aa      View alignments
>bmy_18624T0
IPSTDWRLRQTREHRCCCVRCSVSIPLAATPHELPIIILGQVNGASLNQAKSGTLLSYNGAHTLFTPPNQESLDGISKYKNEIPVKSLTCVQLPTEDFIASGIETAETLRGLSSDVACRRLEGLKQQLPWIRSPRKSETMAWLLFRTTGALTILMVVLLVHGELRIETRGQHGEYETAVQQGKRRYKREWVKFARPCREEEDNSKRNPIATITSDFQANQDITYHISGIGIDQPPFGIFIVDRNTGGINITTIVDREETPSFQITCRALNVLGEDVEKPLILTVKILDINDNVPVFSKSIFMGEIEERSASNSLVMTLNATDADEPNNLNSKIAFKILSQEPAGTPMFLLSRHTGEVHTLTNSLDREQVSSYNLVVHGADRDGEGLATQCECNIKVKDVNDNIPMFRKLQYSASIKENTLSSDLLRFQVIDLDEEFTDNWFAVYSFTSGNDGNWFEIQTDPITNEGILKVVKSLDYEQLQTWKLNVIVTNKAEFHKSIISQHGVQPIQLIIQVINGRNYIPSSFQDIYYPKRHKQYTLGYNYGDLLIIGSKTAQIEFVKSINWAATFMVNKTITAEVLAIDEITGKTSTGTICVQIPGFNEDCPIIVLEKETICSSSPSVVVKIILMGKGEYTGPYTFLQKEKTTELWEITTLDATSAILRSTQQVSPGTYRISPVITDSKGMWCETPKSLVLEVCQCDNSGTCRVPITTETPEQPTEERPGRLGSAAIGLLLLGLLLLLLALLLLLTCYCGTGPIGGVTGGFNPVPDGSEGTIRPWGIEGAQPEDKEIANIYVPPIIANGVDFTENSEVRTNTYAGGTVVEGALGMEVTTHPGAAAGSGAAAEFRTAAGLSNYSTGQSGTMRTRHSMEGTNMDYGEGAINMNFLDSYLSQKAFACAEEDDGQEANDCLLIYDNEGMGAPGSPIGSLGCCSFIADEFDDSCLDSLSPKFKKLAEISLGMDDEAKNSQLPTKESGSGIESSGQSVQVQQSESVRYQTLSGSQGASVLSASGSVLQPAISIRDPLQHGSYLVTETCSASGSHVQTSTAVFDPLLTQNVIVRERVICPISSVPGNLHGLAELQGSGSKICTEDPCSLLMIYLKKIFYIKLLPTHFSDPEIKILKGCHKTTPFRTQILLWLTLLILKCRQFKLDLGKMKAMQVNSKKITSSSSSQKVERIKTARSVSLIFIFRNQQSSARNNTFSTKNTEISSALPDPECTTIPSMTRHRPFQVGVFAFFFFYTWTLFFFFTNAKKKKKSKHNAVVVKTQDNDGHSEQFSSTFNNRNKLPGSHGISFPKSEEVFIFFHNQEKIAKKFLNYKAIQNQSLSCLLYSALEIPLNTQANRDEFIQIKLWLIHTSKVKI*