Part of scaffold_1819 (Scaffold)

For more information consult the page for scaffold_1819 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GTF2B ENSTTRG00000011903 (Bottlenosed dolphin)

Gene Details

general transcription factor IIB

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011289, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.52%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.02)

BT.39806 ENSBTAG00000000504 (Cow)

Gene Details

transcription initiation factor IIB

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000041650, Cow)

Protein Percentage 100.0%
cDNA percentage 96.24%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.1618)

GTF2B  (Minke Whale)

Gene Details

general transcription factor IIB

External Links

Gene match (Identifier: BACU006384, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.76%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0086)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 828 bp    Location:178325..170816   Strand:-
>bmy_18633
GGTGACCGGGTTATCGATGTAGGATCTGAGTGGAGAACTTTCAGCAATGATAAAGCAACAAAAGATCCATCTCGAGTTGGAGATTCTCAGAATCCTCTTCTGAGTGATGGAGATTTGTCTACTATGATTGGCAAGGGTACAGGAGCTGCAAGTTTTGATGAATTTGGTAATTCTAAGTACCAGAATAGGAGAACCATGAGTAGTTCTGATCGGGCAATGATGAATGCATTCAAAGAAATCACTACCATGGCAGACAGAATCAACCTCCCTCGAAATATAGTTGATCGAACAAATAATCTATTCAAGCAAGTGTATGAACAGAAGAGCCTGAAGGGAAGGGCTAATGATGCCATAGCTTCTGCTTGTCTCTATATTGCCTGCAGACAGGAAGGAGTTCCTAGGACATTTAAAGAAATATGTGCCGTATCACGAATTTCTAAGAAAGAAATCGGTCGATGTTTTAAACTTATTTTGAAAGCTTTAGAAACCAGTGTGGATCTGATTACAACTGGGGACTTCATGTCCAGGTTTTGTTCCAACCTTTGTCTTCCTAAACAAGTACAGATGGCAGCTACACATATAGCCCGTAAAGCTGTGGAGTTGGACTTGGTTCCTGGAAGGAGCCCAATATCTGTGGCAGCAGCCGCCATTTACATGGCCTCACAGGCATCAGCTGAGAAAAGGACCCAAAAAGAAATTGGAGATATTGCTGGTGTTGCTGATGTTACAATCAGACAGTCCTACAGGCTAATCTATCCTCGGGCCCCAGACCTGTTTCCTACAGACTTCAAATTTGACACCCCTGTGGACAAACTACCACAGCTATAA

Related Sequences

bmy_18633T0 Protein

Length: 276 aa      View alignments
>bmy_18633T0
GDRVIDVGSEWRTFSNDKATKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKEITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLFPTDFKFDTPVDKLPQL*