Sequence detailsbmy_18645 (Coding sequence)

Part of scaffold_1811 (SequenceType object (1))

For more information consult the page for scaffold_1811 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM15ENSTTRG00000008571 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 15

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008124, Bottlenosed dolphin)

Protein Percentage 94.41%
cDNA percentage 97.2%
Ka/Ks Ratio 0.58808 (Ka = 0.0243, Ks = 0.0414)

TRIM15ENSBTAG00000007532 (Cow)

Gene Details

tripartite motif-containing protein 15

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000012653, Cow)

Protein Percentage 92.75%
cDNA percentage 93.72%
Ka/Ks Ratio 0.12601 (Ka = 0.0299, Ks = 0.2374)

TRIM15 (Minke Whale)

Gene Details

tripartite motif containing 15

External Links

Gene match (Identifier: BACU007864, Minke Whale)

Protein Percentage 98.14%
cDNA percentage 99.12%
Ka/Ks Ratio 0.67837 (Ka = 0.0067, Ks = 0.0099)

Additional orthologs identified in other species via the OPTIC pipeline.

Trim15 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1293 bp    Location:71198..62449   Strand:-
Raw sequence 
>bmy_18645
ATGATGCCCTCCACCCCCTCCCACAAAGGGGCCGCCTGTTCTGAGTGCAAAGGGCCCCTGGAGGATTCAGTGACCGCCACCTGTGGACACACCTTCTGCCGGCACTGTCTCCCCCCACCCTCCCAGATGGGTGCCCAGCCCTCCGGCAGGGTCCTGCTCTGTCCCCTCTGCAAGGAGAAGGAGCAGACCGAGACCCTCTTGGTCCCCGTGCCCCTGGGCCCCCCGGGGGAGACTTACTGCGAGGAGCATGGTGAGAAGATCTACTTCTTCTGCGAGAATGATGCCGAGTTCCTCTGTGTGTTCTGCCGGGAGGGTCCCTCCCACCAGGCCCACGTCGTGGGCTTCCTGGACGAGGCCATCCAGCCCTACCGGACTCAGATTGAAAGCAAGAAGCAGCAGGTGGAAGCGGCTTTTGAGAGGTTGCAGCAGGAGCTGGGGGAACACCAGCRTCTCCTGCTGGCCAGGCTGACGGAGCTGGAGCAGCAGATCTGGAAGGAGAGGGGCGAGTATATCTCAAAGCTCTCTGAGGAAGTCGCCCGRCTTGGAGCCCAGGTCAAAGAGCTGGAGGAGAAGAGTCAGCAACCAGCAAGTGAGCTTCTACAAGATGTCAGAGTCAACCAGAGCAGGTATGAGATGACGACTTTTGTGAGTCCAGAGGCCATTTCTCCTGACCTTGTCAAAAAGATCCGCGATCTCCACAGGAAAATACTCACCCTCCCAGAGATGATGAGGGCGTTCTCAGAAAACTTGGTGCATCATCTGGAAACAGATACAGGGGTTGTCACTCTGGACCCTCAGACCGCCAGCCAGAGCCTGGTCCTCTCCGAGGACAGGAAGTCTGTGAAGTATACCCGGCGGAAGCAGAACCTGCCCGACAGCCGCCTGCGCTTCGAGGGTCTCCCGGTGGTGCTGGGCTCCCCCGGCTTCTCCTCGGGGCGCCACCGCTGGCAGGTGGAGGTGCAGCTGGGAGACGGCGGCGGCTGCACGGTGGGGGTGGTCGGGGAGGAGGTGAGGAGGAAAGGGAAGCAGGGTCTGAGCGCCGAGGAGGGCGTCTGGGCGGTGATCCTCTCCCACCAGCAGTGCTGGGCCAGCACCTCGCCGGGCACCGACCTGCCGCTGAGCGAGATCCCGCGCCTCGTGGGCGTCGCCCTGGACTACGAGGCGGGGAGCTTGGCCCTGCTCAACGCCGAGACCCAGGCGCCCATCTTCACCTTCACCGCCTCCTTCTCCGGCAAAGTCTATCCTTTCTTCGCTGTCTGGAAAAAAGGTTCTTGCCTTACTTTGAAAGGCTGA

Related Sequences

bmy_18645T0 SequenceType object (3)

Length: 431 aa      View alignments
>bmy_18645T0
MMPSTPSHKGAACSECKGPLEDSVTATCGHTFCRHCLPPPSQMGAQPSGRVLLCPLCKEKEQTETLLVPVPLGPPGETYCEEHGEKIYFFCENDAEFLCVFCREGPSHQAHVVGFLDEAIQPYRTQIESKKQQVEAAFERLQQELGEHQXLLLARLTELEQQIWKERGEYISKLSEEVARLGAQVKELEEKSQQPASELLQDVRVNQSRYEMTTFVSPEAISPDLVKKIRDLHRKILTLPEMMRAFSENLVHHLETDTGVVTLDPQTASQSLVLSEDRKSVKYTRRKQNLPDSRLRFEGLPVVLGSPGFSSGRHRWQVEVQLGDGGGCTVGVVGEEVRRKGKQGLSAEEGVWAVILSHQQCWASTSPGTDLPLSEIPRLVGVALDYEAGSLALLNAETQAPIFTFTASFSGKVYPFFAVWKKGSCLTLKG*