Sequence detailsbmy_18646 (Coding sequence)

Part of scaffold_1811 (SequenceType object (1))

For more information consult the page for scaffold_1811 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM10ENSTTRG00000008565 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 10

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008122, Bottlenosed dolphin)

Protein Percentage 96.72%
cDNA percentage 96.8%
Ka/Ks Ratio 0.20063 (Ka = 0.0176, Ks = 0.0878)

BT.26590ENSBTAG00000007530 (Cow)

Gene Details

tripartite motif-containing protein 10

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000009909, Cow)

Protein Percentage 89.66%
cDNA percentage 89.89%
Ka/Ks Ratio 0.14209 (Ka = 0.0526, Ks = 0.3701)

TRIM10 (Minke Whale)

Gene Details

tripartite motif containing 10

External Links

Gene match (Identifier: BACU007863, Minke Whale)

Protein Percentage 96.32%
cDNA percentage 96.93%
Ka/Ks Ratio 0.35044 (Ka = 0.0223, Ks = 0.0636)

Additional orthologs identified in other species via the OPTIC pipeline.

Trim10 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1308 bp    Location:73561..80931   Strand:+
Raw sequence 
>bmy_18646
ATGGCCTCGGCTGCCTCTGTGACCAGCCTGGCAGATGAGGTCAACTGCCCCATCTGCCAAGGGACCCTCAGGGAGCCGGTCACCATTGACTGTGGCCACAACTTCTGCCGCATCTGCCTCACCCACTACCTTGAGATCCCCAGCCCGGACCCCGAGGAGCCCCCAACCTGCCCACTCTGCAAGGAACCTTTCCGCCCAGGGAGCTTCCGGCCCAATTGGCAGCTGGCCAGCGTGGTGGAGAACATTGAGCGTCTCAAGCTGGTGTCCCGGCTGGACATAGAAGAGGAGGACATCTGCCCCGAGCACGGGGAGAAAGTCTACTTCTTYTGCGAGGATGATGAGACGCAGCTGTGCGTGGTGTGCCGGGAGGCCTGGGAGCACCGTGCCCACACTGTGCGCTTCCTGGAGGACGCGGCTGGGCCCTACAGGACTCAGGTGGCCACCAAGAAACAAAAAGTGATTTCTGAGTTTGCACATCTGAGCCAGTTCCTGGAGGAACAGCAGAGCATCCTCTTAGCCCAGTTGGAGAGGCTGGATGGGGACATCTTAAAGCATCGGGATGAGTTTGATGYCCTGGTCACTGGGGAAATCTCCCGGTTTAGCACCCTCATCGAAGAACTGGAGGAGAAGAAGGAGAGGCCGGCAAGGGAGCTCCTGATGGATATCAGAAGCACTCTAATAAGATGTGAAACCAGAAGGTGTCGGAAACCAGAGGCTGTGATAGCATGTCTGCTGACATCTGTGGCCCTTTTGGTTTTCCCCACAGCTCACATCTCTCTAGACCCCTGGACTTCCCACCCGAAGCTCCTCTTGTCTGAGGACCACCAGCAGGCTCGCTTCTCCTATAAATGGCAGAAGTCACCAGACAGCCCCCAGCGTTTCGACCGGGCCACCTGTGTCCTGGCCCATGGTGGCTTCACTGGGGGGAGACACACGTGGGTGGTGAGTGTGGACTTGGCTCCCGGGGGCAGCTGCACCCTGGGTGTGGTCAATAAGGACATCCGGCGGAAGGGGGAGCTTCGGCTGCGGCCAGAGGAGGGGGTGTGGGCGGTGAGGCTAGCTTGGGGCTTCGTCTCGGCCCTGGGTTCCTTCCCCACCCGCCTGGCCCTGGAGGAGCAGCCCCAGCAGGTGCGGGTGTCTGTCGACTACGAGGTGGGCTGGGTGACCTTTGCCAATGCCGTCACTCAGGAACCCATCTACACCTTCACTGCCTCCTTCACCCAGAAGATCTTTCCCTTCTTTGGGCTCTGGGGACGAGGGTCCAAGTTCTCCCTGAGCTCCCAAGAGGGTGCAGCTACCCTCCCCTAA

Related Sequences

bmy_18646T0 SequenceType object (3)

Length: 436 aa      View alignments
>bmy_18646T0
MASAASVTSLADEVNCPICQGTLREPVTIDCGHNFCRICLTHYLEIPSPDPEEPPTCPLCKEPFRPGSFRPNWQLASVVENIERLKLVSRLDIEEEDICPEHGEKVYFFCEDDETQLCVVCREAWEHRAHTVRFLEDAAGPYRTQVATKKQKVISEFAHLSQFLEEQQSILLAQLERLDGDILKHRDEFDXLVTGEISRFSTLIEELEEKKERPARELLMDIRSTLIRCETRRCRKPEAVIACLLTSVALLVFPTAHISLDPWTSHPKLLLSEDHQQARFSYKWQKSPDSPQRFDRATCVLAHGGFTGGRHTWVVSVDLAPGGSCTLGVVNKDIRRKGELRLRPEEGVWAVRLAWGFVSALGSFPTRLALEEQPQQVRVSVDYEVGWVTFANAVTQEPIYTFTASFTQKIFPFFGLWGRGSKFSLSSQEGAATLP*