Part of scaffold_1811 (Scaffold)

For more information consult the page for scaffold_1811 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM40 ENSTTRG00000008563 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 40

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008117, Bottlenosed dolphin)

Protein Percentage 83.8%
cDNA percentage 88.27%
Ka/Ks Ratio 0.48778 (Ka = 0.1076, Ks = 0.2207)

BT.41777 ENSBTAG00000037381 (Cow)

Gene Details

tripartite motif-containing protein 40

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009916, Cow)

Protein Percentage 66.86%
cDNA percentage 77.71%
Ka/Ks Ratio 0.62774 (Ka = 0.2562, Ks = 0.4081)

TRIM40  (Minke Whale)

Gene Details

tripartite motif containing 40

External Links

Gene match (Identifier: BACU007862, Minke Whale)

Protein Percentage 68.1%
cDNA percentage 75.14%
Ka/Ks Ratio 0.7492 (Ka = 0.2944, Ks = 0.3929)

Genome Location

Sequence Coding sequence

Length: 756 bp    Location:96522..80680   Strand:-
>bmy_18647
ATGCTCCCTCTGCAGGAGGACAGCCGGGAAGAGGGCATCTGCCCCATCTGCCAGGAGTGCCTGAAGGAGGCATCTCACTGTGAACTGGCCATTGAAAATGCCATCAGCCACTACAAGGAACGACTCAACCGCAGGATCAGGAAGCTCAGAAAGGACATCTGTGAACTCCAGCAGCTCAGGGCTCAGGAGGAGGAGAGACTGCAGGCTATGCAGACAGACTGTAGGACCCACAGGCTGGAGGCTGAACTGGAGCGTCAACACCGAGCCGGGAGACAGCTGGATGCCCTCCCTCAGCAGCGGCCAGGCCAGCTGGAGGACATGCCAGCAGAGGTGTCCAGAATCACTGGCATCTCCAGGGCAATGATTCAACTCAGCAGCCTGGTCACTGAACTGGAGGGGATGGCTAAGAAACTGGATGCCAGCCTGCTGAAGGACGCCAGTGACTTATTGAACAGGCGACCCAGCCAGGGTCAAGTCCTTGGGTCCTCTCTTTGGACCCTGTGCTTAGGGGAGGGTAGCTGCACCCTCTTGGGAGCTCAGGGAGAACTTGGACCCTCGTCCCCAGAGCCCAAAGAAGGGAAAGATCTTCTGGGTGAAGGAGGCAGTGAAGGTGTAGATGGGTTCCTGAGTGACGGCATTGGCAAAGGTCACCCAGCCCACCTCGTAGTCGACAGACACCCGCACCTGCTGGGGCTGCTCCTCCAGGGCCAGGCGGGTGGGGAAGGAACCCAGGGCCGAGACGAAGCCCCAAGCTAG

Related Sequences

bmy_18647T0 Protein

Length: 252 aa      View alignments
>bmy_18647T0
MLPLQEDSREEGICPICQECLKEASHCELAIENAISHYKERLNRRIRKLRKDICELQQLRAQEEERLQAMQTDCRTHRLEAELERQHRAGRQLDALPQQRPGQLEDMPAEVSRITGISRAMIQLSSLVTELEGMAKKLDASLLKDASDLLNRRPSQGQVLGSSLWTLCLGEGSCTLLGAQGELGPSSPEPKEGKDLLGEGGSEGVDGFLSDGIGKGHPAHLVVDRHPHLLGLLLQGQAGGEGTQGRDEAPS*